Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
CCDC141Q6ZP82 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
CCDC141Q6ZP82 AC138907.5-202ENST00000569484 235 ntBASIC32.66■■■□□ 2.82
CCDC141Q6ZP82 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
CCDC141Q6ZP82 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 AC079089.2-201ENST00000531211 1277 ntBASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 PARP1-210ENST00000629232 477 ntTSL 5 BASIC32.65■■■□□ 2.82
CCDC141Q6ZP82 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
CCDC141Q6ZP82 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC32.64■■■□□ 2.82
CCDC141Q6ZP82 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC32.64■■■□□ 2.82
CCDC141Q6ZP82 CD99P1-205ENST00000527459 561 ntBASIC32.64■■■□□ 2.82
CCDC141Q6ZP82 AL138781.1-201ENST00000566567 1274 ntBASIC32.64■■■□□ 2.82
CCDC141Q6ZP82 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC32.64■■■□□ 2.82
CCDC141Q6ZP82 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC32.64■■■□□ 2.82
CCDC141Q6ZP82 APTR-203ENST00000430801 583 ntTSL 5 BASIC32.63■■■□□ 2.81
CCDC141Q6ZP82 AC083906.2-201ENST00000511578 360 ntBASIC32.63■■■□□ 2.81
CCDC141Q6ZP82 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC32.63■■■□□ 2.81
CCDC141Q6ZP82 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 AC098934.4-201ENST00000564127 592 ntBASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
CCDC141Q6ZP82 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC32.61■■■□□ 2.81
CCDC141Q6ZP82 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC141Q6ZP82 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC32.6■■■□□ 2.81
CCDC141Q6ZP82 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC141Q6ZP82 KRT18P6-201ENST00000555540 1265 ntBASIC32.6■■■□□ 2.81
CCDC141Q6ZP82 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
CCDC141Q6ZP82 AC010536.3-201ENST00000620306 533 ntBASIC32.6■■■□□ 2.81
CCDC141Q6ZP82 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC32.59■■■□□ 2.81
CCDC141Q6ZP82 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 KRT18P20-201ENST00000548986 1279 ntBASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
CCDC141Q6ZP82 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
CCDC141Q6ZP82 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
CCDC141Q6ZP82 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC32.57■■■□□ 2.8
CCDC141Q6ZP82 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC32.56■■■□□ 2.8
CCDC141Q6ZP82 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
CCDC141Q6ZP82 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
CCDC141Q6ZP82 AP004607.7-201ENST00000527152 1677 ntBASIC32.56■■■□□ 2.8
CCDC141Q6ZP82 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC32.55■■■□□ 2.8
CCDC141Q6ZP82 FXN-202ENST00000396364 980 ntTSL 5 BASIC32.55■■■□□ 2.8
CCDC141Q6ZP82 AC069152.1-201ENST00000438030 544 ntBASIC32.55■■■□□ 2.8
CCDC141Q6ZP82 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC32.55■■■□□ 2.8
CCDC141Q6ZP82 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC32.55■■■□□ 2.8
CCDC141Q6ZP82 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC32.55■■■□□ 2.8
CCDC141Q6ZP82 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CCDC141Q6ZP82 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 SLC29A4P1-201ENST00000398760 971 ntBASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 EEF1DP3-203ENST00000566025 782 ntBASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 CYP2T1P-201ENST00000432607 1285 ntBASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
CCDC141Q6ZP82 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms