Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 BX842568.3-201ENST00000418104 571 ntBASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 AC135279.3-201ENST00000610945 1311 ntBASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 AC092053.2-201ENST00000640557 1818 ntBASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.39■□□□□ 0.69
NHLRC1Q6VVB1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 AC133561.4-201ENST00000566112 224 ntBASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 AC106739.1-201ENST00000617035 715 ntBASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC1Q6VVB1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NHLRC1Q6VVB1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 AC010141.3-201ENST00000456659 717 ntBASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 AL031432.3-201ENST00000607698 485 ntBASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NHLRC1Q6VVB1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 PBX2P1-201ENST00000493219 1291 ntBASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 AC233992.3-201ENST00000607491 485 ntBASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 SLC25A24-204ENST00000569674 2357 ntBASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NHLRC1Q6VVB1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 OXCT2P1-201ENST00000447263 1535 ntBASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NHLRC1Q6VVB1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 AL137060.1-201ENST00000618151 2648 ntBASIC19.33■□□□□ 0.69
NHLRC1Q6VVB1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms