Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 AL512631.2-201ENST00000604634 923 ntBASIC26.37■■□□□ 1.81
CASC1Q6TDU7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
CASC1Q6TDU7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC26.37■■□□□ 1.81
CASC1Q6TDU7 AC068587.7-201ENST00000641602 218 ntBASIC26.37■■□□□ 1.81
CASC1Q6TDU7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.37■■□□□ 1.81
CASC1Q6TDU7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CASC1Q6TDU7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CASC1Q6TDU7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC26.37■■□□□ 1.81
CASC1Q6TDU7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CASC1Q6TDU7 AC010542.4-201ENST00000563151 1910 ntBASIC26.35■■□□□ 1.81
CASC1Q6TDU7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 AC079089.2-201ENST00000531211 1277 ntBASIC26.35■■□□□ 1.81
CASC1Q6TDU7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CASC1Q6TDU7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 FAM99A-202ENST00000538190 1989 ntBASIC26.34■■□□□ 1.81
CASC1Q6TDU7 AC007375.3-201ENST00000600936 2314 ntBASIC26.34■■□□□ 1.81
CASC1Q6TDU7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CASC1Q6TDU7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 OR2I1P-207ENST00000453522 948 ntBASIC26.33■■□□□ 1.81
CASC1Q6TDU7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 AC131281.2-201ENST00000520478 145 ntBASIC26.33■■□□□ 1.81
CASC1Q6TDU7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 AC087239.1-201ENST00000622671 572 ntBASIC26.33■■□□□ 1.81
CASC1Q6TDU7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CASC1Q6TDU7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CASC1Q6TDU7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CASC1Q6TDU7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 MIR4466-201ENST00000606121 54 ntBASIC26.31■■□□□ 1.8
CASC1Q6TDU7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CASC1Q6TDU7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC26.3■■□□□ 1.8
CASC1Q6TDU7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
CASC1Q6TDU7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASC1Q6TDU7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASC1Q6TDU7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.3■■□□□ 1.8
CASC1Q6TDU7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.3■■□□□ 1.8
CASC1Q6TDU7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms