Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
H3F3CQ6NXT2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 AC079834.2-201ENST00000609776 1949 ntBASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.98■□□□□ 0.79
H3F3CQ6NXT2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 AC005224.4-201ENST00000583262 1652 ntBASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 RARRES2P11-201ENST00000635158 484 ntBASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
H3F3CQ6NXT2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 AC004854.2-201ENST00000608450 1441 ntBASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
H3F3CQ6NXT2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 AC006015.1-201ENST00000429970 570 ntBASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.95■□□□□ 0.78
H3F3CQ6NXT2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 AC004911.1-201ENST00000416316 871 ntBASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 AC079140.4-201ENST00000507448 529 ntBASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
H3F3CQ6NXT2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 KRT19P1-201ENST00000405746 1186 ntBASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
H3F3CQ6NXT2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 AC090192.1-201ENST00000517740 490 ntBASIC19.92■□□□□ 0.78
H3F3CQ6NXT2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms