Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPS13DQ5THJ4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 AL596275.1-201ENST00000423464 877 ntBASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 AC068338.2-201ENST00000563278 1430 ntBASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 AC007322.1-201ENST00000426983 750 ntBASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 EEF1DP3-203ENST00000566025 782 ntBASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 AC068587.7-201ENST00000641602 218 ntBASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPS13DQ5THJ4 AC020928.2-201ENST00000588717 2197 ntBASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 AC083880.1-201ENST00000608266 535 ntBASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 SLC29A4P1-201ENST00000398760 971 ntBASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 MYC-209ENST00000641252 345 ntBASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VPS13DQ5THJ4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 AL139125.2-201ENST00000623134 1869 ntBASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 LINC01124-201ENST00000409786 2117 ntBASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.71□□□□□ -0.05
VPS13DQ5THJ4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS13DQ5THJ4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VPS13DQ5THJ4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS13DQ5THJ4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.71□□□□□ -0.06
VPS13DQ5THJ4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS13DQ5THJ4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VPS13DQ5THJ4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.71□□□□□ -0.06
VPS13DQ5THJ4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VPS13DQ5THJ4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 CYP2T1P-201ENST00000432607 1285 ntBASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VPS13DQ5THJ4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms