Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH1Q08174 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH1Q08174 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH1Q08174 OR7E47P-201ENST00000546390 1422 ntBASIC20.86■□□□□ 0.93
PCDH1Q08174 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
PCDH1Q08174 AC008406.3-201ENST00000620001 1374 ntBASIC20.85■□□□□ 0.93
PCDH1Q08174 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH1Q08174 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH1Q08174 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH1Q08174 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH1Q08174 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH1Q08174 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH1Q08174 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH1Q08174 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH1Q08174 AC024257.2-201ENST00000549699 147 ntBASIC20.85■□□□□ 0.93
PCDH1Q08174 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDH1Q08174 AL136162.1-201ENST00000607711 1078 ntBASIC20.85■□□□□ 0.93
PCDH1Q08174 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH1Q08174 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH1Q08174 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH1Q08174 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH1Q08174 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH1Q08174 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH1Q08174 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH1Q08174 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
PCDH1Q08174 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH1Q08174 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH1Q08174 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH1Q08174 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH1Q08174 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH1Q08174 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PCDH1Q08174 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.83■□□□□ 0.93
PCDH1Q08174 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH1Q08174 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH1Q08174 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH1Q08174 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH1Q08174 AC135279.3-201ENST00000610945 1311 ntBASIC20.83■□□□□ 0.93
PCDH1Q08174 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH1Q08174 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH1Q08174 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH1Q08174 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH1Q08174 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDH1Q08174 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PCDH1Q08174 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDH1Q08174 AC233992.3-201ENST00000607491 485 ntBASIC20.83■□□□□ 0.93
PCDH1Q08174 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH1Q08174 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDH1Q08174 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDH1Q08174 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH1Q08174 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH1Q08174 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH1Q08174 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDH1Q08174 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH1Q08174 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.82■□□□□ 0.92
PCDH1Q08174 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDH1Q08174 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDH1Q08174 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDH1Q08174 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDH1Q08174 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDH1Q08174 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDH1Q08174 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.81■□□□□ 0.92
PCDH1Q08174 AC106739.1-201ENST00000617035 715 ntBASIC20.81■□□□□ 0.92
PCDH1Q08174 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDH1Q08174 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDH1Q08174 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
PCDH1Q08174 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH1Q08174 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH1Q08174 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH1Q08174 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDH1Q08174 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH1Q08174 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH1Q08174 FAM99A-202ENST00000538190 1989 ntBASIC20.79■□□□□ 0.92
PCDH1Q08174 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDH1Q08174 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH1Q08174 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH1Q08174 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDH1Q08174 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
PCDH1Q08174 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDH1Q08174 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDH1Q08174 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
PCDH1Q08174 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH1Q08174 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDH1Q08174 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PCDH1Q08174 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH1Q08174 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH1Q08174 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH1Q08174 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PCDH1Q08174 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH1Q08174 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms