Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS1Q01581 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.81■□□□□ 0.92
HMGCS1Q01581 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.81■□□□□ 0.92
HMGCS1Q01581 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS1Q01581 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCS1Q01581 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS1Q01581 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HMGCS1Q01581 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCS1Q01581 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS1Q01581 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS1Q01581 PKD1P6-201ENST00000343738 4769 ntBASIC20.8■□□□□ 0.92
HMGCS1Q01581 AC079089.2-201ENST00000531211 1277 ntBASIC20.8■□□□□ 0.92
HMGCS1Q01581 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
HMGCS1Q01581 AC092171.4-201ENST00000609130 632 ntBASIC20.8■□□□□ 0.92
HMGCS1Q01581 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS1Q01581 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.8■□□□□ 0.92
HMGCS1Q01581 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS1Q01581 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS1Q01581 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HMGCS1Q01581 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HMGCS1Q01581 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HMGCS1Q01581 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HMGCS1Q01581 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
HMGCS1Q01581 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HMGCS1Q01581 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HMGCS1Q01581 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.79■□□□□ 0.92
HMGCS1Q01581 OR2I1P-207ENST00000453522 948 ntBASIC20.79■□□□□ 0.92
HMGCS1Q01581 AC010525.1-201ENST00000585559 441 ntBASIC20.79■□□□□ 0.92
HMGCS1Q01581 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS1Q01581 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS1Q01581 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS1Q01581 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HMGCS1Q01581 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 AC026310.3-201ENST00000625186 2373 ntBASIC20.78■□□□□ 0.92
HMGCS1Q01581 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 SERBP1P1-201ENST00000396021 1160 ntBASIC20.78■□□□□ 0.92
HMGCS1Q01581 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HMGCS1Q01581 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HMGCS1Q01581 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
HMGCS1Q01581 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.77■□□□□ 0.92
HMGCS1Q01581 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HMGCS1Q01581 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
HMGCS1Q01581 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.77■□□□□ 0.92
HMGCS1Q01581 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
HMGCS1Q01581 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HMGCS1Q01581 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.77■□□□□ 0.91
HMGCS1Q01581 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
HMGCS1Q01581 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
HMGCS1Q01581 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HMGCS1Q01581 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCS1Q01581 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCS1Q01581 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGCS1Q01581 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCS1Q01581 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HMGCS1Q01581 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.76■□□□□ 0.91
HMGCS1Q01581 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGCS1Q01581 AC131281.2-201ENST00000520478 145 ntBASIC20.76■□□□□ 0.91
HMGCS1Q01581 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.76■□□□□ 0.91
HMGCS1Q01581 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.76■□□□□ 0.91
HMGCS1Q01581 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.76■□□□□ 0.91
HMGCS1Q01581 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HMGCS1Q01581 SYT6-210ENST00000641643 1587 ntBASIC20.76■□□□□ 0.91
HMGCS1Q01581 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGCS1Q01581 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HMGCS1Q01581 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCS1Q01581 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.75■□□□□ 0.91
HMGCS1Q01581 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCS1Q01581 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HMGCS1Q01581 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HMGCS1Q01581 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms