Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEP78395 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PRAMEP78395 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEP78395 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEP78395 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.75■■□□□ 1.07
PRAMEP78395 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.75■■□□□ 1.07
PRAMEP78395 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.75■■□□□ 1.07
PRAMEP78395 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRAMEP78395 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEP78395 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PRAMEP78395 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEP78395 UNC93B3-201ENST00000308076 687 ntBASIC21.74■■□□□ 1.07
PRAMEP78395 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRAMEP78395 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEP78395 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.74■■□□□ 1.07
PRAMEP78395 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEP78395 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
PRAMEP78395 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRAMEP78395 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.74■■□□□ 1.07
PRAMEP78395 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.74■■□□□ 1.07
PRAMEP78395 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRAMEP78395 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.73■■□□□ 1.07
PRAMEP78395 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRAMEP78395 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRAMEP78395 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PRAMEP78395 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 AC079089.2-201ENST00000531211 1277 ntBASIC21.72■■□□□ 1.07
PRAMEP78395 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.72■■□□□ 1.07
PRAMEP78395 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PRAMEP78395 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEP78395 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEP78395 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEP78395 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PRAMEP78395 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PRAMEP78395 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PRAMEP78395 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEP78395 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEP78395 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PRAMEP78395 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.71■■□□□ 1.07
PRAMEP78395 SLC47A1P1-202ENST00000449666 945 ntBASIC21.71■■□□□ 1.07
PRAMEP78395 AC010141.3-201ENST00000456659 717 ntBASIC21.71■■□□□ 1.07
PRAMEP78395 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEP78395 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEP78395 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PRAMEP78395 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEP78395 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEP78395 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEP78395 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEP78395 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEP78395 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEP78395 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PRAMEP78395 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PRAMEP78395 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 AL136162.1-201ENST00000607711 1078 ntBASIC21.7■■□□□ 1.06
PRAMEP78395 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PRAMEP78395 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
PRAMEP78395 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEP78395 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEP78395 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PRAMEP78395 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.69■■□□□ 1.06
PRAMEP78395 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEP78395 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PRAMEP78395 MIR4767-201ENST00000582827 78 ntBASIC21.69■■□□□ 1.06
PRAMEP78395 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEP78395 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEP78395 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PRAMEP78395 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEP78395 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEP78395 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEP78395 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEP78395 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEP78395 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PRAMEP78395 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.68■■□□□ 1.06
PRAMEP78395 AC024257.2-201ENST00000549699 147 ntBASIC21.68■■□□□ 1.06
PRAMEP78395 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEP78395 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms