Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MIR4767-201ENST00000582827 78 ntBASIC19■□□□□ 0.63
LSM6P62312 AL136162.1-201ENST00000607711 1078 ntBASIC19■□□□□ 0.63
LSM6P62312 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM6P62312 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19■□□□□ 0.63
LSM6P62312 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19■□□□□ 0.63
LSM6P62312 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19■□□□□ 0.63
LSM6P62312 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
LSM6P62312 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19■□□□□ 0.63
LSM6P62312 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM6P62312 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM6P62312 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19■□□□□ 0.63
LSM6P62312 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19■□□□□ 0.63
LSM6P62312 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LSM6P62312 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.99■□□□□ 0.63
LSM6P62312 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.99■□□□□ 0.63
LSM6P62312 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.99■□□□□ 0.63
LSM6P62312 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LSM6P62312 AC135279.3-201ENST00000610945 1311 ntBASIC18.99■□□□□ 0.63
LSM6P62312 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LSM6P62312 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.98■□□□□ 0.63
LSM6P62312 AC024257.2-201ENST00000549699 147 ntBASIC18.98■□□□□ 0.63
LSM6P62312 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
LSM6P62312 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LSM6P62312 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.98■□□□□ 0.63
LSM6P62312 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM6P62312 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM6P62312 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM6P62312 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.97■□□□□ 0.63
LSM6P62312 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM6P62312 FAM99A-202ENST00000538190 1989 ntBASIC18.97■□□□□ 0.63
LSM6P62312 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.97■□□□□ 0.63
LSM6P62312 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM6P62312 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM6P62312 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM6P62312 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM6P62312 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LSM6P62312 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.96■□□□□ 0.63
LSM6P62312 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LSM6P62312 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.96■□□□□ 0.63
LSM6P62312 AC233992.3-201ENST00000607491 485 ntBASIC18.96■□□□□ 0.63
LSM6P62312 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM6P62312 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM6P62312 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM6P62312 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
LSM6P62312 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM6P62312 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.95■□□□□ 0.62
LSM6P62312 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.95■□□□□ 0.62
LSM6P62312 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LSM6P62312 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LSM6P62312 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.95■□□□□ 0.62
LSM6P62312 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.95■□□□□ 0.62
LSM6P62312 AL034346.1-201ENST00000568244 1277 ntBASIC18.95■□□□□ 0.62
LSM6P62312 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LSM6P62312 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LSM6P62312 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LSM6P62312 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LSM6P62312 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM6P62312 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.94■□□□□ 0.62
LSM6P62312 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM6P62312 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.94■□□□□ 0.62
LSM6P62312 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM6P62312 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM6P62312 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM6P62312 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
LSM6P62312 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM6P62312 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.94■□□□□ 0.62
LSM6P62312 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LSM6P62312 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LSM6P62312 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LSM6P62312 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms