Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLDN8P56748 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLDN8P56748 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLDN8P56748 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
CLDN8P56748 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN8P56748 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN8P56748 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.56■□□□□ 0.88
CLDN8P56748 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 OR7E47P-201ENST00000546390 1422 ntBASIC20.56■□□□□ 0.88
CLDN8P56748 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 OR2I1P-207ENST00000453522 948 ntBASIC20.56■□□□□ 0.88
CLDN8P56748 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLDN8P56748 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN8P56748 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CLDN8P56748 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN8P56748 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN8P56748 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLDN8P56748 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN8P56748 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN8P56748 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN8P56748 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN8P56748 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN8P56748 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN8P56748 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN8P56748 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.54■□□□□ 0.88
CLDN8P56748 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN8P56748 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN8P56748 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN8P56748 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.54■□□□□ 0.88
CLDN8P56748 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN8P56748 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN8P56748 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN8P56748 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.54■□□□□ 0.88
CLDN8P56748 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLDN8P56748 AC092171.4-201ENST00000609130 632 ntBASIC20.54■□□□□ 0.88
CLDN8P56748 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN8P56748 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLDN8P56748 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN8P56748 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLDN8P56748 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN8P56748 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN8P56748 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN8P56748 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN8P56748 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN8P56748 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN8P56748 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN8P56748 SRD5A1P1-201ENST00000442297 786 ntBASIC20.53■□□□□ 0.88
CLDN8P56748 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN8P56748 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.53■□□□□ 0.88
CLDN8P56748 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN8P56748 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN8P56748 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN8P56748 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN8P56748 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CLDN8P56748 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.52■□□□□ 0.88
CLDN8P56748 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.52■□□□□ 0.88
CLDN8P56748 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLDN8P56748 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLDN8P56748 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN8P56748 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN8P56748 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN8P56748 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.52■□□□□ 0.88
CLDN8P56748 AL512631.2-201ENST00000604634 923 ntBASIC20.52■□□□□ 0.88
CLDN8P56748 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
CLDN8P56748 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLDN8P56748 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CLDN8P56748 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN8P56748 Z98882.1-201ENST00000622160 2253 ntBASIC20.51■□□□□ 0.87
CLDN8P56748 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CLDN8P56748 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.51■□□□□ 0.87
CLDN8P56748 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.51■□□□□ 0.87
CLDN8P56748 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN8P56748 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.51■□□□□ 0.87
CLDN8P56748 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CLDN8P56748 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLDN8P56748 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
CLDN8P56748 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN8P56748 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.5■□□□□ 0.87
CLDN8P56748 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN8P56748 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CLDN8P56748 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN8P56748 AC087239.1-201ENST00000622671 572 ntBASIC20.5■□□□□ 0.87
CLDN8P56748 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLDN8P56748 AC026471.6-201ENST00000622954 1905 ntBASIC20.5■□□□□ 0.87
CLDN8P56748 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms