Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.84■□□□□ 0.93
CLDN6P56747 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN6P56747 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN6P56747 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN6P56747 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CLDN6P56747 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CLDN6P56747 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN6P56747 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.83■□□□□ 0.93
CLDN6P56747 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN6P56747 AC093827.2-201ENST00000512654 315 ntBASIC20.83■□□□□ 0.93
CLDN6P56747 MYCNOS-205ENST00000641950 531 ntBASIC20.83■□□□□ 0.93
CLDN6P56747 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CLDN6P56747 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CLDN6P56747 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CLDN6P56747 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN6P56747 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN6P56747 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN6P56747 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN6P56747 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN6P56747 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN6P56747 ABCB10P4-201ENST00000566803 2184 ntBASIC20.82■□□□□ 0.92
CLDN6P56747 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN6P56747 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN6P56747 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN6P56747 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CLDN6P56747 FAM201B-201ENST00000458407 597 ntBASIC20.82■□□□□ 0.92
CLDN6P56747 AP001160.3-201ENST00000601484 763 ntBASIC20.82■□□□□ 0.92
CLDN6P56747 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN6P56747 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CLDN6P56747 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN6P56747 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN6P56747 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLDN6P56747 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
CLDN6P56747 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN6P56747 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN6P56747 AC105036.2-201ENST00000569468 176 ntBASIC20.81■□□□□ 0.92
CLDN6P56747 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLDN6P56747 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN6P56747 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CLDN6P56747 LINC01124-201ENST00000409786 2117 ntBASIC20.81■□□□□ 0.92
CLDN6P56747 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN6P56747 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN6P56747 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN6P56747 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN6P56747 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN6P56747 CNN2P6-201ENST00000439038 900 ntBASIC20.8■□□□□ 0.92
CLDN6P56747 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.8■□□□□ 0.92
CLDN6P56747 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN6P56747 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
CLDN6P56747 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.8■□□□□ 0.92
CLDN6P56747 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN6P56747 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.8■□□□□ 0.92
CLDN6P56747 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN6P56747 DUSP8P5-201ENST00000422884 1815 ntBASIC20.8■□□□□ 0.92
CLDN6P56747 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CLDN6P56747 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN6P56747 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLDN6P56747 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN6P56747 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLDN6P56747 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN6P56747 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN6P56747 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN6P56747 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.79■□□□□ 0.92
CLDN6P56747 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN6P56747 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.79■□□□□ 0.92
CLDN6P56747 DUSP8P3-201ENST00000399571 1760 ntBASIC20.79■□□□□ 0.92
CLDN6P56747 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLDN6P56747 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CLDN6P56747 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN6P56747 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN6P56747 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN6P56747 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CLDN6P56747 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN6P56747 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 AF201337.1-201ENST00000520239 748 ntBASIC20.78■□□□□ 0.92
CLDN6P56747 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN6P56747 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN6P56747 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN6P56747 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
CLDN6P56747 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN6P56747 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN6P56747 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CLDN6P56747 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN6P56747 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN6P56747 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CLDN6P56747 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.77■□□□□ 0.92
CLDN6P56747 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN6P56747 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN6P56747 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN6P56747 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN6P56747 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN6P56747 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms