Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SUMO3P55854 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SUMO3P55854 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.61■□□□□ 0.73
SUMO3P55854 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.61■□□□□ 0.73
SUMO3P55854 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SUMO3P55854 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.61■□□□□ 0.73
SUMO3P55854 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SUMO3P55854 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.61■□□□□ 0.73
SUMO3P55854 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.61■□□□□ 0.73
SUMO3P55854 AL358852.1-201ENST00000623174 1268 ntBASIC19.61■□□□□ 0.73
SUMO3P55854 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SUMO3P55854 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.6■□□□□ 0.73
SUMO3P55854 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.6■□□□□ 0.73
SUMO3P55854 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.6■□□□□ 0.73
SUMO3P55854 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.6■□□□□ 0.73
SUMO3P55854 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.6■□□□□ 0.73
SUMO3P55854 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SUMO3P55854 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SUMO3P55854 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SUMO3P55854 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.59■□□□□ 0.73
SUMO3P55854 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.59■□□□□ 0.73
SUMO3P55854 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SUMO3P55854 IRS3P-201ENST00000223076 1006 ntBASIC19.59■□□□□ 0.73
SUMO3P55854 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.59■□□□□ 0.73
SUMO3P55854 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SUMO3P55854 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SUMO3P55854 AC012414.1-201ENST00000556676 535 ntBASIC19.59■□□□□ 0.73
SUMO3P55854 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SUMO3P55854 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SUMO3P55854 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SUMO3P55854 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.58■□□□□ 0.73
SUMO3P55854 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.58■□□□□ 0.73
SUMO3P55854 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SUMO3P55854 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SUMO3P55854 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SUMO3P55854 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SUMO3P55854 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SUMO3P55854 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SUMO3P55854 AC079834.2-201ENST00000609776 1949 ntBASIC19.58■□□□□ 0.72
SUMO3P55854 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
SUMO3P55854 AP004607.7-201ENST00000527152 1677 ntBASIC19.58■□□□□ 0.72
SUMO3P55854 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SUMO3P55854 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.58■□□□□ 0.72
SUMO3P55854 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SUMO3P55854 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.58■□□□□ 0.72
SUMO3P55854 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SUMO3P55854 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.57■□□□□ 0.72
SUMO3P55854 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SUMO3P55854 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SUMO3P55854 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
SUMO3P55854 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SUMO3P55854 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.57■□□□□ 0.72
SUMO3P55854 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.57■□□□□ 0.72
SUMO3P55854 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.57■□□□□ 0.72
SUMO3P55854 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SUMO3P55854 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SUMO3P55854 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.57■□□□□ 0.72
SUMO3P55854 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SUMO3P55854 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SUMO3P55854 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SUMO3P55854 C11orf96-202ENST00000528572 1834 ntBASIC19.56■□□□□ 0.72
SUMO3P55854 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.56■□□□□ 0.72
SUMO3P55854 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SUMO3P55854 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SUMO3P55854 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SUMO3P55854 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SUMO3P55854 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SUMO3P55854 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.56■□□□□ 0.72
SUMO3P55854 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.56■□□□□ 0.72
SUMO3P55854 AC009237.3-201ENST00000393279 1427 ntBASIC19.56■□□□□ 0.72
SUMO3P55854 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SUMO3P55854 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.56■□□□□ 0.72
SUMO3P55854 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SUMO3P55854 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SUMO3P55854 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SUMO3P55854 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SUMO3P55854 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SUMO3P55854 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SUMO3P55854 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SUMO3P55854 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms