Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH13P55290 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH13P55290 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH13P55290 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH13P55290 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH13P55290 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH13P55290 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CDH13P55290 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH13P55290 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.11■□□□□ 0.97
CDH13P55290 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.11■□□□□ 0.97
CDH13P55290 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH13P55290 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH13P55290 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDH13P55290 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.11■□□□□ 0.97
CDH13P55290 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDH13P55290 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
CDH13P55290 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH13P55290 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH13P55290 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH13P55290 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.1■□□□□ 0.97
CDH13P55290 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH13P55290 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.1■□□□□ 0.97
CDH13P55290 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.1■□□□□ 0.97
CDH13P55290 MIR3181-201ENST00000578512 73 ntBASIC21.1■□□□□ 0.97
CDH13P55290 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CDH13P55290 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDH13P55290 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.1■□□□□ 0.97
CDH13P55290 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH13P55290 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDH13P55290 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.09■□□□□ 0.97
CDH13P55290 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDH13P55290 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH13P55290 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH13P55290 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH13P55290 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CDH13P55290 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH13P55290 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH13P55290 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH13P55290 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH13P55290 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDH13P55290 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.08■□□□□ 0.97
CDH13P55290 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDH13P55290 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDH13P55290 AC079089.2-201ENST00000531211 1277 ntBASIC21.08■□□□□ 0.97
CDH13P55290 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CDH13P55290 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH13P55290 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDH13P55290 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH13P55290 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.08■□□□□ 0.96
CDH13P55290 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH13P55290 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CDH13P55290 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH13P55290 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH13P55290 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH13P55290 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDH13P55290 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH13P55290 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH13P55290 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH13P55290 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH13P55290 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.06■□□□□ 0.96
CDH13P55290 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH13P55290 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH13P55290 SRD5A1P1-201ENST00000442297 786 ntBASIC21.06■□□□□ 0.96
CDH13P55290 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH13P55290 AL512631.2-201ENST00000604634 923 ntBASIC21.06■□□□□ 0.96
CDH13P55290 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDH13P55290 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH13P55290 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CDH13P55290 AC244015.2-201ENST00000616358 1861 ntBASIC21.06■□□□□ 0.96
CDH13P55290 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH13P55290 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms