Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKN2DP55273 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.4■■□□□ 1.02
CDKN2DP55273 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.4■■□□□ 1.02
CDKN2DP55273 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKN2DP55273 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDKN2DP55273 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDKN2DP55273 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDKN2DP55273 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.39■■□□□ 1.02
CDKN2DP55273 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.39■■□□□ 1.02
CDKN2DP55273 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.39■■□□□ 1.02
CDKN2DP55273 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKN2DP55273 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKN2DP55273 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDKN2DP55273 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKN2DP55273 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKN2DP55273 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
CDKN2DP55273 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDKN2DP55273 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDKN2DP55273 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.39■■□□□ 1.01
CDKN2DP55273 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.39■■□□□ 1.01
CDKN2DP55273 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDKN2DP55273 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CDKN2DP55273 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDKN2DP55273 OR7E47P-201ENST00000546390 1422 ntBASIC21.38■■□□□ 1.01
CDKN2DP55273 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.38■■□□□ 1.01
CDKN2DP55273 AC010141.3-201ENST00000456659 717 ntBASIC21.38■■□□□ 1.01
CDKN2DP55273 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN2DP55273 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.38■■□□□ 1.01
CDKN2DP55273 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN2DP55273 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDKN2DP55273 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.37■■□□□ 1.01
CDKN2DP55273 AC026471.6-201ENST00000622954 1905 ntBASIC21.37■■□□□ 1.01
CDKN2DP55273 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKN2DP55273 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKN2DP55273 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.37■■□□□ 1.01
CDKN2DP55273 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKN2DP55273 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKN2DP55273 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.37■■□□□ 1.01
CDKN2DP55273 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDKN2DP55273 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.37■■□□□ 1.01
CDKN2DP55273 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDKN2DP55273 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
CDKN2DP55273 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKN2DP55273 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKN2DP55273 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKN2DP55273 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKN2DP55273 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDKN2DP55273 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDKN2DP55273 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.36■■□□□ 1.01
CDKN2DP55273 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.36■■□□□ 1.01
CDKN2DP55273 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CDKN2DP55273 AC087239.1-201ENST00000622671 572 ntBASIC21.36■■□□□ 1.01
CDKN2DP55273 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDKN2DP55273 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKN2DP55273 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKN2DP55273 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDKN2DP55273 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.35■■□□□ 1.01
CDKN2DP55273 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CDKN2DP55273 UNC93B3-201ENST00000308076 687 ntBASIC21.35■■□□□ 1.01
CDKN2DP55273 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.35■■□□□ 1.01
CDKN2DP55273 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDKN2DP55273 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
CDKN2DP55273 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
CDKN2DP55273 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKN2DP55273 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.35■■□□□ 1.01
CDKN2DP55273 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDKN2DP55273 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDKN2DP55273 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDKN2DP55273 OXCT2P1-201ENST00000447263 1535 ntBASIC21.34■■□□□ 1.01
CDKN2DP55273 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN2DP55273 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN2DP55273 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDKN2DP55273 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN2DP55273 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN2DP55273 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN2DP55273 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN2DP55273 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN2DP55273 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.34■■□□□ 1.01
CDKN2DP55273 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CDKN2DP55273 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDKN2DP55273 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKN2DP55273 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDKN2DP55273 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
CDKN2DP55273 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDKN2DP55273 MIR4767-201ENST00000582827 78 ntBASIC21.33■■□□□ 1.01
CDKN2DP55273 AL137060.1-201ENST00000618151 2648 ntBASIC21.33■■□□□ 1
CDKN2DP55273 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKN2DP55273 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKN2DP55273 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CDKN2DP55273 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKN2DP55273 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CDKN2DP55273 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDKN2DP55273 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.33■■□□□ 1
CDKN2DP55273 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN2DP55273 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDKN2DP55273 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN2DP55273 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDKN2DP55273 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.32■■□□□ 1
CDKN2DP55273 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.32■■□□□ 1
CDKN2DP55273 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms