Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE1AP54750 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE1AP54750 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE1AP54750 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.51■■□□□ 1.83
PDE1AP54750 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.51■■□□□ 1.83
PDE1AP54750 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.51■■□□□ 1.83
PDE1AP54750 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
PDE1AP54750 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
PDE1AP54750 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE1AP54750 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PDE1AP54750 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDE1AP54750 FAM99A-202ENST00000538190 1989 ntBASIC26.5■■□□□ 1.83
PDE1AP54750 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDE1AP54750 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
PDE1AP54750 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.5■■□□□ 1.83
PDE1AP54750 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PDE1AP54750 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PDE1AP54750 AL031432.3-201ENST00000607698 485 ntBASIC26.5■■□□□ 1.83
PDE1AP54750 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
PDE1AP54750 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDE1AP54750 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PDE1AP54750 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PDE1AP54750 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.49■■□□□ 1.83
PDE1AP54750 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDE1AP54750 AP001330.3-201ENST00000520123 633 ntBASIC26.49■■□□□ 1.83
PDE1AP54750 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.49■■□□□ 1.83
PDE1AP54750 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.49■■□□□ 1.83
PDE1AP54750 AC008764.7-201ENST00000593779 1081 ntBASIC26.49■■□□□ 1.83
PDE1AP54750 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
PDE1AP54750 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.49■■□□□ 1.83
PDE1AP54750 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.49■■□□□ 1.83
PDE1AP54750 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PDE1AP54750 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 EDA-201ENST00000338901 1233 ntBASIC26.48■■□□□ 1.83
PDE1AP54750 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.48■■□□□ 1.83
PDE1AP54750 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.48■■□□□ 1.83
PDE1AP54750 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
PDE1AP54750 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDE1AP54750 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.47■■□□□ 1.83
PDE1AP54750 AC010542.4-201ENST00000563151 1910 ntBASIC26.47■■□□□ 1.83
PDE1AP54750 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC26.47■■□□□ 1.83
PDE1AP54750 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.46■■□□□ 1.83
PDE1AP54750 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 AC099791.1-201ENST00000416440 715 ntBASIC26.46■■□□□ 1.83
PDE1AP54750 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
PDE1AP54750 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 FBXW4P1-201ENST00000426721 2239 ntBASIC26.46■■□□□ 1.83
PDE1AP54750 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
PDE1AP54750 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PDE1AP54750 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.45■■□□□ 1.83
PDE1AP54750 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
PDE1AP54750 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.45■■□□□ 1.83
PDE1AP54750 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PDE1AP54750 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PDE1AP54750 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDE1AP54750 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDE1AP54750 AC126544.1-201ENST00000580842 1059 ntBASIC26.45■■□□□ 1.82
PDE1AP54750 AL139246.5-201ENST00000606645 996 ntBASIC26.45■■□□□ 1.82
PDE1AP54750 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDE1AP54750 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDE1AP54750 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
PDE1AP54750 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PDE1AP54750 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PDE1AP54750 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
PDE1AP54750 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 AC026471.6-201ENST00000622954 1905 ntBASIC26.44■■□□□ 1.82
PDE1AP54750 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 MIR939-201ENST00000401314 82 ntBASIC26.44■■□□□ 1.82
PDE1AP54750 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.44■■□□□ 1.82
PDE1AP54750 AL355001.2-201ENST00000620617 1191 ntBASIC26.44■■□□□ 1.82
PDE1AP54750 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.44■■□□□ 1.82
PDE1AP54750 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PDE1AP54750 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
PDE1AP54750 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PDE1AP54750 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDE1AP54750 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.43■■□□□ 1.82
PDE1AP54750 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.43■■□□□ 1.82
PDE1AP54750 IGHV3-19-201ENST00000521488 291 ntBASIC26.43■■□□□ 1.82
PDE1AP54750 AC027682.1-201ENST00000562846 899 ntBASIC26.43■■□□□ 1.82
PDE1AP54750 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDE1AP54750 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms