Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN3P51790 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.85■■□□□ 1.41
CLCN3P51790 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.85■■□□□ 1.41
CLCN3P51790 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.85■■□□□ 1.41
CLCN3P51790 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN3P51790 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN3P51790 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN3P51790 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN3P51790 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CLCN3P51790 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.85■■□□□ 1.41
CLCN3P51790 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN3P51790 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN3P51790 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CLCN3P51790 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CLCN3P51790 AC006015.1-201ENST00000429970 570 ntBASIC23.84■■□□□ 1.41
CLCN3P51790 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.84■■□□□ 1.41
CLCN3P51790 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN3P51790 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.84■■□□□ 1.41
CLCN3P51790 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.84■■□□□ 1.41
CLCN3P51790 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.84■■□□□ 1.41
CLCN3P51790 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.84■■□□□ 1.41
CLCN3P51790 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.84■■□□□ 1.41
CLCN3P51790 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN3P51790 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.84■■□□□ 1.41
CLCN3P51790 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CLCN3P51790 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN3P51790 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN3P51790 OR7E47P-201ENST00000546390 1422 ntBASIC23.84■■□□□ 1.41
CLCN3P51790 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.84■■□□□ 1.41
CLCN3P51790 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLCN3P51790 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.84■■□□□ 1.41
CLCN3P51790 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN3P51790 AP004607.7-201ENST00000527152 1677 ntBASIC23.83■■□□□ 1.41
CLCN3P51790 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
CLCN3P51790 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN3P51790 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN3P51790 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN3P51790 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN3P51790 AC016769.1-201ENST00000409132 1010 ntBASIC23.83■■□□□ 1.41
CLCN3P51790 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.83■■□□□ 1.41
CLCN3P51790 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.83■■□□□ 1.41
CLCN3P51790 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.83■■□□□ 1.41
CLCN3P51790 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLCN3P51790 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.82■■□□□ 1.4
CLCN3P51790 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CLCN3P51790 KRT19P1-201ENST00000405746 1186 ntBASIC23.82■■□□□ 1.4
CLCN3P51790 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.82■■□□□ 1.4
CLCN3P51790 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.82■■□□□ 1.4
CLCN3P51790 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC23.82■■□□□ 1.4
CLCN3P51790 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN3P51790 AC137767.1-201ENST00000602918 1920 ntBASIC23.82■■□□□ 1.4
CLCN3P51790 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN3P51790 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLCN3P51790 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CLCN3P51790 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CLCN3P51790 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CLCN3P51790 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN3P51790 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCN3P51790 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.81■■□□□ 1.4
CLCN3P51790 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN3P51790 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN3P51790 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLCN3P51790 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN3P51790 AC055733.4-201ENST00000638462 1354 ntBASIC23.8■■□□□ 1.4
CLCN3P51790 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.8■■□□□ 1.4
CLCN3P51790 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN3P51790 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN3P51790 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN3P51790 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN3P51790 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN3P51790 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLCN3P51790 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.8■■□□□ 1.4
CLCN3P51790 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CLCN3P51790 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.79■■□□□ 1.4
CLCN3P51790 C9orf163-202ENST00000624034 2573 ntBASIC23.79■■□□□ 1.4
CLCN3P51790 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CLCN3P51790 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.79■■□□□ 1.4
CLCN3P51790 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.79■■□□□ 1.4
CLCN3P51790 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.79■■□□□ 1.4
CLCN3P51790 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.79■■□□□ 1.4
CLCN3P51790 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CLCN3P51790 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 KRT87P-202ENST00000534226 1464 ntBASIC23.79■■□□□ 1.4
CLCN3P51790 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLCN3P51790 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.79■■□□□ 1.4
CLCN3P51790 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN3P51790 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.78■■□□□ 1.4
CLCN3P51790 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN3P51790 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLCN3P51790 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.78■■□□□ 1.4
CLCN3P51790 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms