Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLK3P49761 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLK3P49761 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLK3P49761 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CLK3P49761 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLK3P49761 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.38■□□□□ 0.85
CLK3P49761 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLK3P49761 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLK3P49761 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.37■□□□□ 0.85
CLK3P49761 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLK3P49761 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.37■□□□□ 0.85
CLK3P49761 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.37■□□□□ 0.85
CLK3P49761 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.37■□□□□ 0.85
CLK3P49761 AL138724.1-201ENST00000606771 1088 ntBASIC20.37■□□□□ 0.85
CLK3P49761 pRNA.6-201ENST00000610482 90 ntBASIC20.37■□□□□ 0.85
CLK3P49761 pRNA.5-201ENST00000612139 90 ntBASIC20.37■□□□□ 0.85
CLK3P49761 pRNA.11-201ENST00000618423 90 ntBASIC20.37■□□□□ 0.85
CLK3P49761 pRNA.13-201ENST00000619112 90 ntBASIC20.37■□□□□ 0.85
CLK3P49761 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.37■□□□□ 0.85
CLK3P49761 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CLK3P49761 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLK3P49761 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.36■□□□□ 0.85
CLK3P49761 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CLK3P49761 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLK3P49761 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLK3P49761 AC087742.1-201ENST00000575880 1738 ntBASIC20.36■□□□□ 0.85
CLK3P49761 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLK3P49761 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK3P49761 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK3P49761 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.35■□□□□ 0.85
CLK3P49761 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.35■□□□□ 0.85
CLK3P49761 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK3P49761 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK3P49761 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLK3P49761 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
CLK3P49761 AL499627.2-201ENST00000606283 725 ntBASIC20.35■□□□□ 0.85
CLK3P49761 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLK3P49761 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLK3P49761 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK3P49761 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLK3P49761 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLK3P49761 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLK3P49761 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.34■□□□□ 0.85
CLK3P49761 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.34■□□□□ 0.85
CLK3P49761 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLK3P49761 AC006455.2-201ENST00000429931 906 ntBASIC20.34■□□□□ 0.85
CLK3P49761 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.34■□□□□ 0.85
CLK3P49761 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.34■□□□□ 0.85
CLK3P49761 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLK3P49761 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CLK3P49761 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLK3P49761 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.34■□□□□ 0.85
CLK3P49761 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLK3P49761 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLK3P49761 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLK3P49761 PKD1P6-201ENST00000343738 4769 ntBASIC20.34■□□□□ 0.85
CLK3P49761 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLK3P49761 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLK3P49761 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.33■□□□□ 0.85
CLK3P49761 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CLK3P49761 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLK3P49761 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.33■□□□□ 0.85
CLK3P49761 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.33■□□□□ 0.85
CLK3P49761 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLK3P49761 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
CLK3P49761 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CLK3P49761 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLK3P49761 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CLK3P49761 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.33■□□□□ 0.84
CLK3P49761 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.32■□□□□ 0.84
CLK3P49761 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.32■□□□□ 0.84
CLK3P49761 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.32■□□□□ 0.84
CLK3P49761 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.32■□□□□ 0.84
CLK3P49761 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.32■□□□□ 0.84
CLK3P49761 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms