Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 TAF7YMR227C 1773 nt4.06□□□□□ -1.76
UPF3P48412 YKL050CYKL050C 2769 nt4.06□□□□□ -1.76
UPF3P48412 CHL1YPL008W 2586 nt4.06□□□□□ -1.76
UPF3P48412 KRE28YDR532C 1158 nt4.05□□□□□ -1.76
UPF3P48412 PRP18YGR006W 756 nt4.05□□□□□ -1.76
UPF3P48412 YHR173CYHR173C 339 nt4.05□□□□□ -1.76
UPF3P48412 YIL156W-AYIL156W-A 402 nt4.05□□□□□ -1.76
UPF3P48412 YIR023C-AYIR023C-A 324 nt4.05□□□□□ -1.76
UPF3P48412 FMP46YKR049C 402 nt4.05□□□□□ -1.76
UPF3P48412 YML094C-AYML094C-A 402 nt4.05□□□□□ -1.76
UPF3P48412 RPL15BYMR121C 615 nt4.05□□□□□ -1.76
UPF3P48412 RRP7YCL031C 894 nt4.05□□□□□ -1.76
UPF3P48412 GDH2YDL215C 3279 nt4.04□□□□□ -1.76
UPF3P48412 TSC13YDL015C 933 nt4.04□□□□□ -1.76
UPF3P48412 GIC2YDR309C 1152 nt4.04□□□□□ -1.76
UPF3P48412 TCA17YEL048C 459 nt4.04□□□□□ -1.76
UPF3P48412 GTT1YIR038C 705 nt4.04□□□□□ -1.76
UPF3P48412 RPL14AYKL006W 417 nt4.04□□□□□ -1.76
UPF3P48412 YML031C-AYML031C-A 336 nt4.04□□□□□ -1.76
UPF3P48412 FYV6YNL133C 522 nt4.04□□□□□ -1.76
UPF3P48412 CPR8YNR028W 927 nt4.04□□□□□ -1.76
UPF3P48412 FIG1YBR040W 897 nt4.04□□□□□ -1.76
UPF3P48412 TAF3YPL011C 1062 nt4.04□□□□□ -1.76
UPF3P48412 AME1YBR211C 975 nt4.04□□□□□ -1.76
UPF3P48412 PBI1YPL272C 1554 nt4.04□□□□□ -1.76
UPF3P48412 SST2YLR452C 2097 nt4.03□□□□□ -1.76
UPF3P48412 MRPL32YCR003W 552 nt4.03□□□□□ -1.76
UPF3P48412 AML1YGR001C 747 nt4.03□□□□□ -1.76
UPF3P48412 YGR270C-AYGR270C-A 219 nt4.03□□□□□ -1.76
UPF3P48412 PFS1YHR185C 714 nt4.03□□□□□ -1.76
UPF3P48412 YNK1YKL067W 462 nt4.03□□□□□ -1.76
UPF3P48412 PML39YML107C 1005 nt4.03□□□□□ -1.76
UPF3P48412 PNO1YOR145C 825 nt4.03□□□□□ -1.76
UPF3P48412 YOR379CYOR379C 339 nt4.03□□□□□ -1.76
UPF3P48412 PHM7YOL084W 2976 nt4.03□□□□□ -1.76
UPF3P48412 SLI1YGR212W 1407 nt4.03□□□□□ -1.76
UPF3P48412 MIS1YBR084W 2928 nt4.02□□□□□ -1.77
UPF3P48412 PTA1YAL043C 2358 nt4.02□□□□□ -1.77
UPF3P48412 SNU23YDL098C 585 nt4.02□□□□□ -1.77
UPF3P48412 PDS1YDR113C 1122 nt4.02□□□□□ -1.77
UPF3P48412 BMH1YER177W 804 nt4.02□□□□□ -1.77
UPF3P48412 HTD2YHR067W 843 nt4.02□□□□□ -1.77
UPF3P48412 IRC18YJL037W 675 nt4.02□□□□□ -1.77
UPF3P48412 MAK16YAL025C 921 nt4.02□□□□□ -1.77
UPF3P48412 PER33YLR064W 822 nt4.02□□□□□ -1.77
UPF3P48412 IRC13YOR235W 315 nt4.02□□□□□ -1.77
UPF3P48412 SPT15YER148W 723 nt4.01□□□□□ -1.77
UPF3P48412 YJR038CYJR038C 363 nt4.01□□□□□ -1.77
UPF3P48412 REX4YOL080C 870 nt4.01□□□□□ -1.77
UPF3P48412 YBR013CYBR013C 390 nt4.01□□□□□ -1.77
UPF3P48412 TPA1YER049W 1935 nt4.01□□□□□ -1.77
UPF3P48412 YDL199CYDL199C 2064 nt4□□□□□ -1.77
UPF3P48412 BIO2YGR286C 1128 nt4□□□□□ -1.77
UPF3P48412 CFD1YIL003W 882 nt4□□□□□ -1.77
UPF3P48412 YKE4YIL023C 1041 nt4□□□□□ -1.77
UPF3P48412 ALB1YJL122W 528 nt4□□□□□ -1.77
UPF3P48412 PEP4YPL154C 1218 nt4□□□□□ -1.77
UPF3P48412 CCL1YPR025C 1182 nt4□□□□□ -1.77
UPF3P48412 VHS3YOR054C 2025 nt4□□□□□ -1.77
UPF3P48412 YTM1YOR272W 1383 nt4□□□□□ -1.77
UPF3P48412 TRK1YJL129C 3708 nt3.99□□□□□ -1.77
UPF3P48412 SSH1YBR283C 1473 nt3.99□□□□□ -1.77
UPF3P48412 PRP9YDL030W 1593 nt3.99□□□□□ -1.77
UPF3P48412 IMD4YML056C 1575 nt3.99□□□□□ -1.77
UPF3P48412 PHO5YBR093C 1404 nt3.99□□□□□ -1.77
UPF3P48412 FMP10YER182W 735 nt3.99□□□□□ -1.77
UPF3P48412 EFB1YAL003W 621 nt3.99□□□□□ -1.77
UPF3P48412 YAL004WYAL004W 648 nt3.99□□□□□ -1.77
UPF3P48412 GCD14YJL125C 1152 nt3.99□□□□□ -1.77
UPF3P48412 YLR198CYLR198C 360 nt3.99□□□□□ -1.77
UPF3P48412 YAR075WYAR075W 474 nt3.99□□□□□ -1.77
UPF3P48412 TRM112YNR046W 408 nt3.99□□□□□ -1.77
UPF3P48412 PRM4YPL156C 855 nt3.99□□□□□ -1.77
UPF3P48412 YPR078CYPR078C 1119 nt3.99□□□□□ -1.77
UPF3P48412 YPR136CYPR136C 513 nt3.99□□□□□ -1.77
UPF3P48412 YBR292CYBR292C 372 nt3.99□□□□□ -1.77
UPF3P48412 RPO31YOR116C 4383 nt3.98□□□□□ -1.77
UPF3P48412 ORC4YPR162C 1590 nt3.98□□□□□ -1.77
UPF3P48412 YDR340WYDR340W 303 nt3.98□□□□□ -1.77
UPF3P48412 YGR190CYGR190C 366 nt3.98□□□□□ -1.77
UPF3P48412 ENT3YJR125C 1227 nt3.98□□□□□ -1.77
UPF3P48412 YJR128WYJR128W 360 nt3.98□□□□□ -1.77
UPF3P48412 DIB1YPR082C 432 nt3.98□□□□□ -1.77
UPF3P48412 YBR141W-AYBR141W-A 96 nt3.98□□□□□ -1.77
UPF3P48412 EBS1YDR206W 2655 nt3.98□□□□□ -1.77
UPF3P48412 BCS1YDR375C 1371 nt3.98□□□□□ -1.77
UPF3P48412 TMA108YIL137C 2841 nt3.98□□□□□ -1.77
UPF3P48412 YHR202WYHR202W 1809 nt3.98□□□□□ -1.77
UPF3P48412 CPA2YJR109C 3357 nt3.97□□□□□ -1.77
UPF3P48412 RPS25AYGR027C 327 nt3.97□□□□□ -1.77
UPF3P48412 CAP2YIL034C 864 nt3.97□□□□□ -1.77
UPF3P48412 AUR1YKL004W 1206 nt3.97□□□□□ -1.77
UPF3P48412 RPF2YKR081C 1035 nt3.97□□□□□ -1.77
UPF3P48412 BOS1YLR078C 735 nt3.97□□□□□ -1.77
UPF3P48412 SIW14YNL032W 846 nt3.97□□□□□ -1.77
UPF3P48412 PET20YPL159C 762 nt3.97□□□□□ -1.77
UPF3P48412 PWR1PWR1 941 nt3.97□□□□□ -1.77
UPF3P48412 STP22YCL008C 1158 nt3.97□□□□□ -1.77
UPF3P48412 MDM10YAL010C 1482 nt3.97□□□□□ -1.77
UPF3P48412 ATG2YNL242W 4779 nt3.97□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms