Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR2P43308 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR2P43308 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR2P43308 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR2P43308 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SSR2P43308 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSR2P43308 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSR2P43308 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR2P43308 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSR2P43308 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.61■□□□□ 0.89
SSR2P43308 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.61■□□□□ 0.89
SSR2P43308 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SSR2P43308 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SSR2P43308 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.6■□□□□ 0.89
SSR2P43308 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.6■□□□□ 0.89
SSR2P43308 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.6■□□□□ 0.89
SSR2P43308 AC133561.4-201ENST00000566112 224 ntBASIC20.6■□□□□ 0.89
SSR2P43308 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.6■□□□□ 0.89
SSR2P43308 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.6■□□□□ 0.89
SSR2P43308 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.6■□□□□ 0.89
SSR2P43308 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
SSR2P43308 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.6■□□□□ 0.89
SSR2P43308 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SSR2P43308 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSR2P43308 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.59■□□□□ 0.89
SSR2P43308 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.59■□□□□ 0.89
SSR2P43308 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 MIR939-201ENST00000401314 82 ntBASIC20.59■□□□□ 0.89
SSR2P43308 AC091305.1-201ENST00000479476 895 ntBASIC20.59■□□□□ 0.89
SSR2P43308 IGHV3-19-201ENST00000521488 291 ntBASIC20.59■□□□□ 0.89
SSR2P43308 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.59■□□□□ 0.89
SSR2P43308 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.59■□□□□ 0.89
SSR2P43308 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
SSR2P43308 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSR2P43308 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSR2P43308 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSR2P43308 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SSR2P43308 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
SSR2P43308 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SSR2P43308 AL031432.3-201ENST00000607698 485 ntBASIC20.58■□□□□ 0.89
SSR2P43308 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.58■□□□□ 0.89
SSR2P43308 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSR2P43308 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.58■□□□□ 0.88
SSR2P43308 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SSR2P43308 RASA4CP-201ENST00000424092 1398 ntBASIC20.58■□□□□ 0.88
SSR2P43308 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SSR2P43308 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.57■□□□□ 0.88
SSR2P43308 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.57■□□□□ 0.88
SSR2P43308 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SSR2P43308 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SSR2P43308 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR2P43308 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SSR2P43308 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR2P43308 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR2P43308 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR2P43308 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR2P43308 AC142381.2-201ENST00000566120 298 ntBASIC20.56■□□□□ 0.88
SSR2P43308 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SSR2P43308 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SSR2P43308 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
SSR2P43308 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.56■□□□□ 0.88
SSR2P43308 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SSR2P43308 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR2P43308 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
SSR2P43308 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SSR2P43308 TSPY26P-201ENST00000476365 1326 ntBASIC20.55■□□□□ 0.88
SSR2P43308 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.55■□□□□ 0.88
SSR2P43308 C11orf96-202ENST00000528572 1834 ntBASIC20.55■□□□□ 0.88
SSR2P43308 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SSR2P43308 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSR2P43308 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SSR2P43308 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR2P43308 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SSR2P43308 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SSR2P43308 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms