Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 CEM1YER061C 1329 nt8.16□□□□□ -1.1
PTP3P40048 YER084WYER084W 387 nt8.16□□□□□ -1.1
PTP3P40048 CDC23YHR166C 1881 nt8.16□□□□□ -1.1
PTP3P40048 YMR310CYMR310C 954 nt8.16□□□□□ -1.1
PTP3P40048 YOR277CYOR277C 309 nt8.16□□□□□ -1.1
PTP3P40048 YOR392WYOR392W 444 nt8.16□□□□□ -1.1
PTP3P40048 YPL035CYPL035C 348 nt8.16□□□□□ -1.1
PTP3P40048 SSO1YPL232W 873 nt8.16□□□□□ -1.1
PTP3P40048 SPH1YLR313C 1593 nt8.15□□□□□ -1.1
PTP3P40048 snR5snR5 204 nt8.15□□□□□ -1.1
PTP3P40048 YJL028WYJL028W 336 nt8.15□□□□□ -1.1
PTP3P40048 RNH203YLR154C 333 nt8.15□□□□□ -1.1
PTP3P40048 YMR046W-AYMR046W-A 129 nt8.15□□□□□ -1.1
PTP3P40048 CBC2YPL178W 627 nt8.15□□□□□ -1.1
PTP3P40048 PPN1YDR452W 2025 nt8.14□□□□□ -1.11
PTP3P40048 FMN1YDR236C 657 nt8.14□□□□□ -1.11
PTP3P40048 RPL12AYEL054C 498 nt8.14□□□□□ -1.11
PTP3P40048 YGR121W-AYGR121W-A 216 nt8.14□□□□□ -1.11
PTP3P40048 MSN1YOL116W 1149 nt8.14□□□□□ -1.11
PTP3P40048 CET1YPL228W 1650 nt8.14□□□□□ -1.11
PTP3P40048 RIX7YLL034C 2514 nt8.13□□□□□ -1.11
PTP3P40048 FMP30YPL103C 1407 nt8.13□□□□□ -1.11
PTP3P40048 CMK2YOL016C 1344 nt8.13□□□□□ -1.11
PTP3P40048 UPS2YLR168C 693 nt8.13□□□□□ -1.11
PTP3P40048 BSC3YLR465C 309 nt8.13□□□□□ -1.11
PTP3P40048 RPN7YPR108W 1290 nt8.13□□□□□ -1.11
PTP3P40048 ADF1YCL058W-A 342 nt8.13□□□□□ -1.11
PTP3P40048 MDL2YPL270W 2322 nt8.13□□□□□ -1.11
PTP3P40048 THR4YCR053W 1545 nt8.13□□□□□ -1.11
PTP3P40048 RAD28YDR030C 1521 nt8.13□□□□□ -1.11
PTP3P40048 MOT2YER068W 1764 nt8.12□□□□□ -1.11
PTP3P40048 YRB1YDR002W 606 nt8.12□□□□□ -1.11
PTP3P40048 SOL4YGR248W 768 nt8.12□□□□□ -1.11
PTP3P40048 MCR1YKL150W 909 nt8.12□□□□□ -1.11
PTP3P40048 YAR023CYAR023C 540 nt8.12□□□□□ -1.11
PTP3P40048 OCA2YNL056W 594 nt8.12□□□□□ -1.11
PTP3P40048 ATG12YBR217W 561 nt8.12□□□□□ -1.11
PTP3P40048 PAC2YER007W 1557 nt8.12□□□□□ -1.11
PTP3P40048 TPO3YPR156C 1869 nt8.12□□□□□ -1.11
PTP3P40048 TFB2YPL122C 1542 nt8.12□□□□□ -1.11
PTP3P40048 PUF3YLL013C 2640 nt8.11□□□□□ -1.11
PTP3P40048 YPL250W-AYPL250W-A 288 nt8.11□□□□□ -1.11
PTP3P40048 YBR076C-AYBR076C-A 267 nt8.11□□□□□ -1.11
PTP3P40048 snR54snR54 86 nt8.11□□□□□ -1.11
PTP3P40048 AMD2YDR242W 1650 nt8.11□□□□□ -1.11
PTP3P40048 DUG1YFR044C 1446 nt8.11□□□□□ -1.11
PTP3P40048 ERG4YGL012W 1422 nt8.11□□□□□ -1.11
PTP3P40048 AFR1YDR085C 1863 nt8.11□□□□□ -1.11
PTP3P40048 MRK1YDL079C 1506 nt8.1□□□□□ -1.11
PTP3P40048 MMT1YMR177W 1533 nt8.1□□□□□ -1.11
PTP3P40048 YDL012CYDL012C 324 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)BtG(GCC)B 71 nt8.1□□□□□ -1.11
PTP3P40048 SUF16tG(GCC)C 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)D1tG(GCC)D1 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)D2tG(GCC)D2 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)EtG(GCC)E 71 nt8.1□□□□□ -1.11
PTP3P40048 SUF20tG(GCC)F1 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)F2tG(GCC)F2 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)G1tG(GCC)G1 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)G2tG(GCC)G2 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)J1tG(GCC)J1 71 nt8.1□□□□□ -1.11
PTP3P40048 SUF23tG(GCC)J2 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)MtG(GCC)M 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)O1tG(GCC)O1 71 nt8.1□□□□□ -1.11
PTP3P40048 SUF17tG(GCC)O2 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)P1tG(GCC)P1 71 nt8.1□□□□□ -1.11
PTP3P40048 tG(GCC)P2tG(GCC)P2 71 nt8.1□□□□□ -1.11
PTP3P40048 YER175W-AYER175W-A 165 nt8.1□□□□□ -1.11
PTP3P40048 MIC26YGR235C 702 nt8.1□□□□□ -1.11
PTP3P40048 tR(ACG)JtR(ACG)J 73 nt8.1□□□□□ -1.11
PTP3P40048 MAK16YAL025C 921 nt8.1□□□□□ -1.11
PTP3P40048 ERG3YLR056W 1098 nt8.1□□□□□ -1.11
PTP3P40048 TIF11YMR260C 462 nt8.1□□□□□ -1.11
PTP3P40048 YNR034W-AYNR034W-A 297 nt8.1□□□□□ -1.11
PTP3P40048 PDB1YBR221C 1101 nt8.1□□□□□ -1.11
PTP3P40048 HEL1YKR017C 1656 nt8.1□□□□□ -1.11
PTP3P40048 ARP9YMR033W 1404 nt8.1□□□□□ -1.11
PTP3P40048 GEX2YKR106W 1848 nt8.1□□□□□ -1.11
PTP3P40048 YKR078WYKR078W 1758 nt8.1□□□□□ -1.11
PTP3P40048 MAK5YBR142W 2322 nt8.09□□□□□ -1.11
PTP3P40048 HAP4YKL109W 1665 nt8.09□□□□□ -1.11
PTP3P40048 NMD5YJR132W 3147 nt8.09□□□□□ -1.11
PTP3P40048 SAT4YCR008W 1812 nt8.09□□□□□ -1.11
PTP3P40048 NCB2YDR397C 441 nt8.09□□□□□ -1.11
PTP3P40048 SLO1YER180C-A 258 nt8.09□□□□□ -1.11
PTP3P40048 YHL002C-AYHL002C-A 489 nt8.09□□□□□ -1.11
PTP3P40048 MEH1YKR007W 555 nt8.09□□□□□ -1.11
PTP3P40048 YMR290W-AYMR290W-A 348 nt8.09□□□□□ -1.11
PTP3P40048 YNL042W-BYNL042W-B 258 nt8.09□□□□□ -1.11
PTP3P40048 MUD2YKL074C 1584 nt8.09□□□□□ -1.11
PTP3P40048 TEA1YOR337W 2280 nt8.09□□□□□ -1.11
PTP3P40048 ILV1YER086W 1731 nt8.09□□□□□ -1.11
PTP3P40048 FLC2YAL053W 2352 nt8.08□□□□□ -1.12
PTP3P40048 OCT1YKL134C 2319 nt8.08□□□□□ -1.12
PTP3P40048 XKS1YGR194C 1803 nt8.08□□□□□ -1.12
PTP3P40048 EDE1YBL047C 4146 nt8.08□□□□□ -1.12
PTP3P40048 SEC20YDR498C 1152 nt8.08□□□□□ -1.12
PTP3P40048 CDC43YGL155W 1131 nt8.08□□□□□ -1.12
PTP3P40048 YHR052W-AYHR052W-A 195 nt8.08□□□□□ -1.12
PTP3P40048 YHR054W-AYHR054W-A 195 nt8.08□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms