Protein–RNA interactions for Protein: P38996

NAB3, Nuclear polyadenylated RNA-binding protein 3, yeast

Known RBP RIP-Chip data

Length 802 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
NAB3	P38996	YKL162C	YKL162C	1209 nt		4.25	□□□□□ -1.73
NAB3	P38996	YKT6	YKL196C	603 nt		4.25	□□□□□ -1.73
NAB3	P38996	TVP18	YMR071C	504 nt		4.25	□□□□□ -1.73
NAB3	P38996	PIN4	YBL051C	2007 nt		4.25	□□□□□ -1.73
NAB3	P38996	AIF1	YNR074C	1137 nt		4.25	□□□□□ -1.73
NAB3	P38996	THR4	YCR053W	1545 nt		4.25	□□□□□ -1.73
NAB3	P38996	ECM18	YDR125C	1362 nt		4.25	□□□□□ -1.73
NAB3	P38996	PHO81	YGR233C	3537 nt		4.25	□□□□□ -1.73
NAB3	P38996	MTC4	YBR255W	2085 nt		4.25	□□□□□ -1.73
NAB3	P38996	PEP5	YMR231W	3090 nt		4.25	□□□□□ -1.73
NAB3	P38996	YML096W	YML096W	1578 nt		4.24	□□□□□ -1.73
NAB3	P38996	YDR431W	YDR431W	312 nt		4.24	□□□□□ -1.73
NAB3	P38996	JAC1	YGL018C	555 nt		4.24	□□□□□ -1.73
NAB3	P38996	SUT1	YGL162W	900 nt		4.24	□□□□□ -1.73
NAB3	P38996	YIR023C-A	YIR023C-A	324 nt		4.24	□□□□□ -1.73
NAB3	P38996	SAW1	YAL027W	786 nt		4.24	□□□□□ -1.73
NAB3	P38996	YLL047W	YLL047W	384 nt		4.24	□□□□□ -1.73
NAB3	P38996	YNL171C	YNL171C	369 nt		4.24	□□□□□ -1.73
NAB3	P38996	HHF1	YBR009C	312 nt		4.24	□□□□□ -1.73
NAB3	P38996	FDH2	YPL275W	711 nt		4.24	□□□□□ -1.73
NAB3	P38996	VPS17	YOR132W	1656 nt		4.24	□□□□□ -1.73
NAB3	P38996	TFB2	YPL122C	1542 nt		4.24	□□□□□ -1.73
NAB3	P38996	NUP2	YLR335W	2163 nt		4.24	□□□□□ -1.73
NAB3	P38996	NOC2	YOR206W	2133 nt		4.24	□□□□□ -1.73	RIP-Chip
NAB3	P38996	YCR024C-B	YCR024C-B	267 nt		4.23	□□□□□ -1.73
NAB3	P38996	UBC8	YEL012W	657 nt		4.23	□□□□□ -1.73
NAB3	P38996	YJR071W	YJR071W	369 nt		4.23	□□□□□ -1.73
NAB3	P38996	YAR019W-A	YAR019W-A	333 nt		4.23	□□□□□ -1.73
NAB3	P38996	YBL006W-A	YBL006W-A	150 nt		4.23	□□□□□ -1.73
NAB3	P38996	RRP40	YOL142W	723 nt		4.23	□□□□□ -1.73
NAB3	P38996	RPS7A	YOR096W	573 nt		4.23	□□□□□ -1.73
NAB3	P38996	YPR169W-A	YPR169W-A	219 nt		4.23	□□□□□ -1.73
NAB3	P38996	YPR170W-B	YPR170W-B	258 nt		4.23	□□□□□ -1.73
NAB3	P38996	NOP8	YOL144W	1455 nt		4.23	□□□□□ -1.73
NAB3	P38996	FAR10	YLR238W	1437 nt		4.22	□□□□□ -1.73
NAB3	P38996	YDL242W	YDL242W	354 nt		4.22	□□□□□ -1.73
NAB3	P38996	PEX10	YDR265W	1014 nt		4.22	□□□□□ -1.73
NAB3	P38996	GRX2	YDR513W	432 nt		4.22	□□□□□ -1.73
NAB3	P38996	RPS23A	YGR118W	438 nt		4.22	□□□□□ -1.73
NAB3	P38996	SDS3	YIL084C	984 nt		4.22	□□□□□ -1.73
NAB3	P38996	SEC65	YML105C	822 nt		4.22	□□□□□ -1.73
NAB3	P38996	MVD1	YNR043W	1191 nt		4.22	□□□□□ -1.73
NAB3	P38996	YOR238W	YOR238W	912 nt		4.22	□□□□□ -1.73
NAB3	P38996	RPS23B	YPR132W	438 nt		4.22	□□□□□ -1.73
NAB3	P38996	MRP2	YPR166C	348 nt		4.22	□□□□□ -1.73
NAB3	P38996	AIP1	YMR092C	1848 nt		4.22	□□□□□ -1.73
NAB3	P38996	XRS2	YDR369C	2565 nt		4.22	□□□□□ -1.73
NAB3	P38996	FOX2	YKR009C	2703 nt		4.22	□□□□□ -1.73
NAB3	P38996	YDR545C-A	YDR545C-A	480 nt		4.21	□□□□□ -1.74
NAB3	P38996	YEL077W-A	YEL077W-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YER190C-B	YER190C-B	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YFL068W	YFL068W	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YGR064W	YGR064W	369 nt		4.21	□□□□□ -1.74
NAB3	P38996	PTI1	YGR156W	1278 nt		4.21	□□□□□ -1.74
NAB3	P38996	YGR296C-B	YGR296C-B	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YHL050W-A	YHL050W-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YHR219C-A	YHR219C-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YIL177W-A	YIL177W-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YJL225W-A	YJL225W-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	ARC19	YKL013C	516 nt		4.21	□□□□□ -1.74
NAB3	P38996	YLL066W-A	YLL066W-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YLL067W-A	YLL067W-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YLR466C-A	YLR466C-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YLR467C-A	YLR467C-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YML133W-B	YML133W-B	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YNL339W-B	YNL339W-B	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	IZH4	YOL101C	939 nt		4.21	□□□□□ -1.74
NAB3	P38996	YBL113W-A	YBL113W-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YOR396C-A	YOR396C-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YPL283W-B	YPL283W-B	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	YPR204C-A	YPR204C-A	483 nt		4.21	□□□□□ -1.74
NAB3	P38996	HRD1	YOL013C	1656 nt		4.21	□□□□□ -1.74
NAB3	P38996	YPS7	YDR349C	1791 nt		4.21	□□□□□ -1.74	RIP-Chip
NAB3	P38996	CHD1	YER164W	4407 nt		4.21	□□□□□ -1.74
NAB3	P38996	YER158C	YER158C	1722 nt		4.21	□□□□□ -1.74
NAB3	P38996	RRB1	YMR131C	1536 nt		4.21	□□□□□ -1.74
NAB3	P38996	YGR237C	YGR237C	2358 nt		4.2	□□□□□ -1.74
NAB3	P38996	MNL1	YHR204W	2391 nt		4.2	□□□□□ -1.74
NAB3	P38996	AKL1	YBR059C	3327 nt		4.2	□□□□□ -1.74
NAB3	P38996	NUP159	YIL115C	4383 nt		4.2	□□□□□ -1.74
NAB3	P38996	IPI3	YNL182C	1668 nt		4.2	□□□□□ -1.74
NAB3	P38996	YTM1	YOR272W	1383 nt		4.2	□□□□□ -1.74
NAB3	P38996	RRG1	YDR065W	1098 nt		4.2	□□□□□ -1.74
NAB3	P38996	NKP1	YDR383C	717 nt		4.2	□□□□□ -1.74
NAB3	P38996	LRS4	YDR439W	1044 nt		4.2	□□□□□ -1.74
NAB3	P38996	YDR535C	YDR535C	501 nt		4.2	□□□□□ -1.74
NAB3	P38996	HOT13	YKL084W	351 nt		4.2	□□□□□ -1.74
NAB3	P38996	RNH203	YLR154C	333 nt		4.2	□□□□□ -1.74	RIP-Chip
NAB3	P38996	SLZ1	YNL196C	897 nt		4.2	□□□□□ -1.74
NAB3	P38996	RRP7	YCL031C	894 nt		4.2	□□□□□ -1.74
NAB3	P38996	LYP1	YNL268W	1836 nt		4.2	□□□□□ -1.74
NAB3	P38996	VIP1	YLR410W	3441 nt		4.2	□□□□□ -1.74
NAB3	P38996	TAF5	YBR198C	2397 nt		4.19	□□□□□ -1.74
NAB3	P38996	XRN1	YGL173C	4587 nt		4.19	□□□□□ -1.74
NAB3	P38996	ITT1	YML068W	1395 nt		4.19	□□□□□ -1.74
NAB3	P38996	PER1	YCR044C	1074 nt		4.19	□□□□□ -1.74
NAB3	P38996	RRP42	YDL111C	798 nt		4.19	□□□□□ -1.74	RIP-Chip
NAB3	P38996	TYW3	YGL050W	822 nt		4.19	□□□□□ -1.74
NAB3	P38996	YHR173C	YHR173C	339 nt		4.19	□□□□□ -1.74
NAB3	P38996	YPT7	YML001W	627 nt		4.19	□□□□□ -1.74	RIP-Chip

Retrieved 100 of 7,029 protein–RNA pairs in 27.1 ms