Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.84■■□□□ 1.41
HOXC8P31273 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
HOXC8P31273 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
HOXC8P31273 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.84■■□□□ 1.41
HOXC8P31273 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
HOXC8P31273 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC8P31273 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC8P31273 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.83■■□□□ 1.41
HOXC8P31273 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.83■■□□□ 1.41
HOXC8P31273 GPX1P1-201ENST00000388829 606 ntBASIC23.83■■□□□ 1.41
HOXC8P31273 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.83■■□□□ 1.41
HOXC8P31273 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
HOXC8P31273 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.83■■□□□ 1.41
HOXC8P31273 AC142086.2-201ENST00000569753 217 ntBASIC23.83■■□□□ 1.41
HOXC8P31273 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.83■■□□□ 1.41
HOXC8P31273 AC231657.2-201ENST00000624556 255 ntBASIC23.83■■□□□ 1.41
HOXC8P31273 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.83■■□□□ 1.41
HOXC8P31273 MYCNOS-205ENST00000641950 531 ntBASIC23.83■■□□□ 1.41
HOXC8P31273 LINC00526-201ENST00000581067 1875 ntBASIC23.83■■□□□ 1.4
HOXC8P31273 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC8P31273 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
HOXC8P31273 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC8P31273 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC8P31273 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC8P31273 AC138907.5-202ENST00000569484 235 ntBASIC23.82■■□□□ 1.4
HOXC8P31273 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC8P31273 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
HOXC8P31273 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.82■■□□□ 1.4
HOXC8P31273 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
HOXC8P31273 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.81■■□□□ 1.4
HOXC8P31273 AP004607.7-201ENST00000527152 1677 ntBASIC23.81■■□□□ 1.4
HOXC8P31273 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC8P31273 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC8P31273 GUSBP6-202ENST00000438529 1198 ntBASIC23.81■■□□□ 1.4
HOXC8P31273 AC010141.2-201ENST00000452426 721 ntBASIC23.81■■□□□ 1.4
HOXC8P31273 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
HOXC8P31273 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.81■■□□□ 1.4
HOXC8P31273 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.8■■□□□ 1.4
HOXC8P31273 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC8P31273 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.8■■□□□ 1.4
HOXC8P31273 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC8P31273 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC8P31273 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC8P31273 AL355802.2-201ENST00000402069 882 ntBASIC23.8■■□□□ 1.4
HOXC8P31273 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.8■■□□□ 1.4
HOXC8P31273 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.8■■□□□ 1.4
HOXC8P31273 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.8■■□□□ 1.4
HOXC8P31273 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.8■■□□□ 1.4
HOXC8P31273 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC8P31273 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.8■■□□□ 1.4
HOXC8P31273 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
HOXC8P31273 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
HOXC8P31273 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.8■■□□□ 1.4
HOXC8P31273 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.79■■□□□ 1.4
HOXC8P31273 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC8P31273 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.79■■□□□ 1.4
HOXC8P31273 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.79■■□□□ 1.4
HOXC8P31273 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC8P31273 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC8P31273 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC8P31273 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
HOXC8P31273 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC8P31273 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.79■■□□□ 1.4
HOXC8P31273 SLC7A5P2-201ENST00000553010 536 ntBASIC23.79■■□□□ 1.4
HOXC8P31273 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
HOXC8P31273 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
HOXC8P31273 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
HOXC8P31273 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
HOXC8P31273 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
HOXC8P31273 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
HOXC8P31273 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HOXC8P31273 CNN2P6-201ENST00000439038 900 ntBASIC23.78■■□□□ 1.4
HOXC8P31273 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.78■■□□□ 1.4
HOXC8P31273 KRT18P20-201ENST00000548986 1279 ntBASIC23.78■■□□□ 1.4
HOXC8P31273 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.78■■□□□ 1.4
HOXC8P31273 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.78■■□□□ 1.4
HOXC8P31273 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
HOXC8P31273 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
HOXC8P31273 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
HOXC8P31273 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC8P31273 OR7E47P-201ENST00000546390 1422 ntBASIC23.77■■□□□ 1.4
HOXC8P31273 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC8P31273 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC8P31273 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.77■■□□□ 1.4
HOXC8P31273 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC8P31273 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC8P31273 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
HOXC8P31273 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
HOXC8P31273 TSPY6P-201ENST00000448518 926 ntBASIC23.77■■□□□ 1.4
HOXC8P31273 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.77■■□□□ 1.4
HOXC8P31273 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.77■■□□□ 1.4
HOXC8P31273 AL121832.2-201ENST00000610979 668 ntBASIC23.77■■□□□ 1.4
HOXC8P31273 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
HOXC8P31273 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
HOXC8P31273 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.76■■□□□ 1.39
HOXC8P31273 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC8P31273 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
HOXC8P31273 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.76■■□□□ 1.39
HOXC8P31273 AC007322.1-201ENST00000426983 750 ntBASIC23.76■■□□□ 1.39
HOXC8P31273 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms