Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 SPT15YER148W 723 nt2.56□□□□□ -2
CDC39P25655 RPB9YGL070C 369 nt2.56□□□□□ -2
CDC39P25655 YGR011WYGR011W 327 nt2.56□□□□□ -2
CDC39P25655 PRR2YDL214C 2100 nt2.56□□□□□ -2
CDC39P25655 NTO1YPR031W 2247 nt2.56□□□□□ -2
CDC39P25655 RPN2YIL075C 2838 nt2.56□□□□□ -2
CDC39P25655 VFA1YER128W 612 nt2.56□□□□□ -2
CDC39P25655 YOR385WYOR385W 873 nt2.56□□□□□ -2
CDC39P25655 INA17YPL099C 549 nt2.56□□□□□ -2
CDC39P25655 BAR1YIL015W 1764 nt2.56□□□□□ -2
CDC39P25655 EMP70YLR083C 2004 nt2.55□□□□□ -2
CDC39P25655 RPN1YHR027C 2982 nt2.55□□□□□ -2
CDC39P25655 VPS64YDR200C 1815 nt2.55□□□□□ -2
CDC39P25655 UBP5YER144C 2418 nt2.55□□□□□ -2
CDC39P25655 PET54YGR222W 882 nt2.55□□□□□ -2
CDC39P25655 TPK2YPL203W 1143 nt2.55□□□□□ -2
CDC39P25655 YBR255C-AYBR255C-A 363 nt2.55□□□□□ -2
CDC39P25655 PHM6YDR281C 315 nt2.54□□□□□ -2
CDC39P25655 TOM20YGR082W 552 nt2.54□□□□□ -2
CDC39P25655 POG1YIL122W 1056 nt2.54□□□□□ -2
CDC39P25655 YMR294W-AYMR294W-A 360 nt2.54□□□□□ -2
CDC39P25655 YGK3YOL128C 1128 nt2.54□□□□□ -2
CDC39P25655 HEF3YNL014W 3135 nt2.54□□□□□ -2
CDC39P25655 FRE4YNR060W 2160 nt2.54□□□□□ -2
CDC39P25655 BET1YIL004C 429 nt2.53□□□□□ -2
CDC39P25655 PHD1YKL043W 1101 nt2.53□□□□□ -2
CDC39P25655 ELO3YLR372W 1038 nt2.53□□□□□ -2
CDC39P25655 VPS71YML041C 843 nt2.53□□□□□ -2
CDC39P25655 SOF1YLL011W 1470 nt2.53□□□□□ -2
CDC39P25655 GGA1YDR358W 1674 nt2.53□□□□□ -2
CDC39P25655 MET10YFR030W 3108 nt2.53□□□□□ -2
CDC39P25655 NUS1YDL193W 1128 nt2.53□□□□□ -2.01
CDC39P25655 DDI3YNL335W 678 nt2.53□□□□□ -2.01
CDC39P25655 MDM38YOL027C 1722 nt2.52□□□□□ -2.01
CDC39P25655 GCN1YGL195W 8019 nt2.52□□□□□ -2.01
CDC39P25655 RSE1YML049C 4086 nt2.52□□□□□ -2.01
CDC39P25655 MIH1YMR036C 1665 nt2.52□□□□□ -2.01
CDC39P25655 POL3YDL102W 3294 nt2.52□□□□□ -2.01
CDC39P25655 SQS1YNL224C 2304 nt2.52□□□□□ -2.01
CDC39P25655 CDC40YDR364C 1368 nt2.52□□□□□ -2.01
CDC39P25655 PRE4YFR050C 801 nt2.52□□□□□ -2.01
CDC39P25655 RPL36BYPL249C-A 303 nt2.52□□□□□ -2.01
CDC39P25655 ORC1YML065W 2745 nt2.52□□□□□ -2.01
CDC39P25655 DBP10YDL031W 2988 nt2.52□□□□□ -2.01
CDC39P25655 ULP1YPL020C 1866 nt2.52□□□□□ -2.01
CDC39P25655 ILS1YBL076C 3219 nt2.51□□□□□ -2.01
CDC39P25655 PRE1YER012W 597 nt2.51□□□□□ -2.01
CDC39P25655 YHR214C-DYHR214C-D 294 nt2.51□□□□□ -2.01
CDC39P25655 YAR069CYAR069C 294 nt2.51□□□□□ -2.01
CDC39P25655 HTA2YBL003C 399 nt2.51□□□□□ -2.01
CDC39P25655 YNL013CYNL013C 378 nt2.51□□□□□ -2.01
CDC39P25655 YLR177WYLR177W 1887 nt2.51□□□□□ -2.01
CDC39P25655 CSR2YPR030W 3366 nt2.51□□□□□ -2.01
CDC39P25655 YIL025CYIL025C 375 nt2.51□□□□□ -2.01
CDC39P25655 YAL004WYAL004W 648 nt2.51□□□□□ -2.01
CDC39P25655 GPI14YJR013W 1212 nt2.51□□□□□ -2.01
CDC39P25655 SGT1YOR057W 1188 nt2.51□□□□□ -2.01
CDC39P25655 RPS12YOR369C 432 nt2.51□□□□□ -2.01
CDC39P25655 SHG1YBR258C 429 nt2.51□□□□□ -2.01
CDC39P25655 BSD2YBR290W 966 nt2.51□□□□□ -2.01
CDC39P25655 FRE8YLR047C 2061 nt2.51□□□□□ -2.01
CDC39P25655 ALO1YML086C 1581 nt2.51□□□□□ -2.01
CDC39P25655 YPL109CYPL109C 1974 nt2.51□□□□□ -2.01
CDC39P25655 YKL222CYKL222C 2118 nt2.51□□□□□ -2.01
CDC39P25655 ENA2YDR039C 3276 nt2.5□□□□□ -2.01
CDC39P25655 ENA1YDR040C 3276 nt2.5□□□□□ -2.01
CDC39P25655 SRC1YML034W 2505 nt2.5□□□□□ -2.01
CDC39P25655 YCR045W-AYCR045W-A 351 nt2.5□□□□□ -2.01
CDC39P25655 snR70snR70 164 nt2.5□□□□□ -2.01
CDC39P25655 PNC1YGL037C 651 nt2.5□□□□□ -2.01
CDC39P25655 YPT35YHR105W 645 nt2.5□□□□□ -2.01
CDC39P25655 OSW5YMR148W 447 nt2.5□□□□□ -2.01
CDC39P25655 ATG32YIL146C 1590 nt2.5□□□□□ -2.01
CDC39P25655 SSE2YBR169C 2082 nt2.5□□□□□ -2.01
CDC39P25655 YAK1YJL141C 2424 nt2.5□□□□□ -2.01
CDC39P25655 RKM3YBR030W 1659 nt2.5□□□□□ -2.01
CDC39P25655 TAF6YGL112C 1551 nt2.5□□□□□ -2.01
CDC39P25655 SNM1YDR478W 597 nt2.5□□□□□ -2.01
CDC39P25655 YAR1YPL239W 603 nt2.5□□□□□ -2.01
CDC39P25655 FLO9YAL063C 3969 nt2.49□□□□□ -2.01
CDC39P25655 ATG27YJL178C 816 nt2.49□□□□□ -2.01
CDC39P25655 TRI1YMR233W 681 nt2.49□□□□□ -2.01
CDC39P25655 YBL065WYBL065W 345 nt2.49□□□□□ -2.01
CDC39P25655 PRM15YMR278W 1869 nt2.49□□□□□ -2.01
CDC39P25655 YGR027W-BYGR027W-B 5268 nt2.49□□□□□ -2.01
CDC39P25655 YLR227W-BYLR227W-B 5268 nt2.49□□□□□ -2.01
CDC39P25655 YPR158C-DYPR158C-D 5268 nt2.49□□□□□ -2.01
CDC39P25655 PEF1YGR058W 1008 nt2.48□□□□□ -2.01
CDC39P25655 IDI1YPL117C 867 nt2.48□□□□□ -2.01
CDC39P25655 COM2YER130C 1332 nt2.48□□□□□ -2.01
CDC39P25655 ITC1YGL133W 3795 nt2.48□□□□□ -2.01
CDC39P25655 SPO16YHR153C 597 nt2.48□□□□□ -2.01
CDC39P25655 PEX18YHR160C 852 nt2.48□□□□□ -2.01
CDC39P25655 PPA2YMR267W 933 nt2.48□□□□□ -2.01
CDC39P25655 TUM1YOR251C 915 nt2.48□□□□□ -2.01
CDC39P25655 DIM1YPL266W 957 nt2.48□□□□□ -2.01
CDC39P25655 MUP3YHL036W 1641 nt2.48□□□□□ -2.01
CDC39P25655 ISM1YPL040C 3009 nt2.47□□□□□ -2.01
CDC39P25655 MAF1YDR005C 1188 nt2.47□□□□□ -2.01
CDC39P25655 ECO1YFR027W 846 nt2.47□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms