Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.72■■□□□ 1.39
TPM1P09493 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM1P09493 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TPM1P09493 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.72■■□□□ 1.39
TPM1P09493 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.72■■□□□ 1.39
TPM1P09493 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM1P09493 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM1P09493 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM1P09493 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TPM1P09493 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM1P09493 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TPM1P09493 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM1P09493 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM1P09493 AC021242.3-201ENST00000607598 1377 ntBASIC23.71■■□□□ 1.39
TPM1P09493 BX664725.1-201ENST00000438252 379 ntBASIC23.71■■□□□ 1.39
TPM1P09493 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.71■■□□□ 1.39
TPM1P09493 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TPM1P09493 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TPM1P09493 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
TPM1P09493 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.7■■□□□ 1.38
TPM1P09493 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.7■■□□□ 1.38
TPM1P09493 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.7■■□□□ 1.38
TPM1P09493 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.7■■□□□ 1.38
TPM1P09493 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.7■■□□□ 1.38
TPM1P09493 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.7■■□□□ 1.38
TPM1P09493 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
TPM1P09493 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TPM1P09493 AC073130.3-201ENST00000624389 2278 ntBASIC23.7■■□□□ 1.38
TPM1P09493 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM1P09493 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
TPM1P09493 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.69■■□□□ 1.38
TPM1P09493 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM1P09493 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TPM1P09493 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TPM1P09493 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM1P09493 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM1P09493 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TPM1P09493 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM1P09493 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM1P09493 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.68■■□□□ 1.38
TPM1P09493 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM1P09493 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TPM1P09493 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TPM1P09493 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.68■■□□□ 1.38
TPM1P09493 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM1P09493 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TPM1P09493 AL033527.3-201ENST00000566366 1196 ntBASIC23.68■■□□□ 1.38
TPM1P09493 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
TPM1P09493 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TPM1P09493 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.68■■□□□ 1.38
TPM1P09493 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TPM1P09493 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TPM1P09493 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM1P09493 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
TPM1P09493 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.67■■□□□ 1.38
TPM1P09493 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM1P09493 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TPM1P09493 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM1P09493 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
TPM1P09493 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.67■■□□□ 1.38
TPM1P09493 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TPM1P09493 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.67■■□□□ 1.38
TPM1P09493 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
TPM1P09493 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TPM1P09493 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.67■■□□□ 1.38
TPM1P09493 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM1P09493 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TPM1P09493 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM1P09493 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TPM1P09493 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM1P09493 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.66■■□□□ 1.38
TPM1P09493 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.66■■□□□ 1.38
TPM1P09493 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.66■■□□□ 1.38
TPM1P09493 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TPM1P09493 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TPM1P09493 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.66■■□□□ 1.38
TPM1P09493 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.66■■□□□ 1.38
TPM1P09493 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
TPM1P09493 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM1P09493 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TPM1P09493 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM1P09493 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM1P09493 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.65■■□□□ 1.38
TPM1P09493 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM1P09493 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.65■■□□□ 1.38
TPM1P09493 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TPM1P09493 AC009102.2-201ENST00000606772 1639 ntBASIC23.65■■□□□ 1.38
TPM1P09493 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM1P09493 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM1P09493 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TPM1P09493 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
TPM1P09493 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms