Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC14.06□□□□□ -0.16
PKHD1P08F94 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC14.06□□□□□ -0.16
PKHD1P08F94 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKHD1P08F94 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKHD1P08F94 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PKHD1P08F94 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.06□□□□□ -0.16
PKHD1P08F94 RPS2P4-201ENST00000476944 856 ntBASIC14.06□□□□□ -0.16
PKHD1P08F94 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.06□□□□□ -0.16
PKHD1P08F94 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PKHD1P08F94 AC013268.1-206ENST00000638368 961 ntBASIC14.06□□□□□ -0.16
PKHD1P08F94 AC112229.1-201ENST00000639295 961 ntBASIC14.06□□□□□ -0.16
PKHD1P08F94 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PKHD1P08F94 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKHD1P08F94 MIPEPP3-201ENST00000412105 444 ntBASIC14.06□□□□□ -0.16
PKHD1P08F94 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.06□□□□□ -0.16
PKHD1P08F94 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC14.06□□□□□ -0.16
PKHD1P08F94 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKHD1P08F94 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.06□□□□□ -0.16
PKHD1P08F94 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKHD1P08F94 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PKHD1P08F94 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
PKHD1P08F94 UNC93B5-201ENST00000530315 699 ntBASIC14.06□□□□□ -0.16
PKHD1P08F94 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.06□□□□□ -0.16
PKHD1P08F94 AP001160.3-201ENST00000601484 763 ntBASIC14.06□□□□□ -0.16
PKHD1P08F94 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
PKHD1P08F94 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.05□□□□□ -0.16
PKHD1P08F94 AC010331.1-201ENST00000611423 582 ntBASIC14.05□□□□□ -0.16
PKHD1P08F94 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 AC005224.4-201ENST00000583262 1652 ntBASIC14.05□□□□□ -0.16
PKHD1P08F94 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 RCN1P1-201ENST00000400413 996 ntBASIC14.05□□□□□ -0.16
PKHD1P08F94 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.05□□□□□ -0.16
PKHD1P08F94 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
PKHD1P08F94 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.05□□□□□ -0.16
PKHD1P08F94 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 FP325331.1-202ENST00000623531 1380 ntBASIC14.05□□□□□ -0.16
PKHD1P08F94 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PKHD1P08F94 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PKHD1P08F94 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC14.05□□□□□ -0.16
PKHD1P08F94 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PKHD1P08F94 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.05□□□□□ -0.16
PKHD1P08F94 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.05□□□□□ -0.16
PKHD1P08F94 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.05□□□□□ -0.16
PKHD1P08F94 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PKHD1P08F94 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.05□□□□□ -0.16
PKHD1P08F94 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.05□□□□□ -0.16
PKHD1P08F94 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PKHD1P08F94 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PKHD1P08F94 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PKHD1P08F94 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC14.04□□□□□ -0.16
PKHD1P08F94 BX088651.1-201ENST00000540551 451 ntBASIC14.04□□□□□ -0.16
PKHD1P08F94 LINC01023-201ENST00000606054 436 ntBASIC14.04□□□□□ -0.16
PKHD1P08F94 AC079630.1-202ENST00000618127 1840 ntBASIC14.04□□□□□ -0.16
PKHD1P08F94 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKHD1P08F94 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.04□□□□□ -0.16
PKHD1P08F94 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PKHD1P08F94 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
PKHD1P08F94 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKHD1P08F94 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKHD1P08F94 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PKHD1P08F94 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.04□□□□□ -0.16
PKHD1P08F94 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.03□□□□□ -0.16
PKHD1P08F94 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC14.03□□□□□ -0.16
PKHD1P08F94 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.03□□□□□ -0.16
PKHD1P08F94 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC14.03□□□□□ -0.16
PKHD1P08F94 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.03□□□□□ -0.16
PKHD1P08F94 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.03□□□□□ -0.16
PKHD1P08F94 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
PKHD1P08F94 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PKHD1P08F94 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PKHD1P08F94 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
PKHD1P08F94 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.02□□□□□ -0.16
PKHD1P08F94 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.02□□□□□ -0.16
PKHD1P08F94 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PKHD1P08F94 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
PKHD1P08F94 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PKHD1P08F94 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PKHD1P08F94 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PKHD1P08F94 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.02□□□□□ -0.17
PKHD1P08F94 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.02□□□□□ -0.17
PKHD1P08F94 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PKHD1P08F94 AC009237.3-201ENST00000393279 1427 ntBASIC14.02□□□□□ -0.17
PKHD1P08F94 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms