Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HLA-DQB2P05538 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.98■■□□□ 1.11
HLA-DQB2P05538 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 C11orf96-202ENST00000528572 1834 ntBASIC21.97■■□□□ 1.11
HLA-DQB2P05538 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DQB2P05538 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQB2P05538 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQB2P05538 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQB2P05538 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQB2P05538 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.95■■□□□ 1.1
HLA-DQB2P05538 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.95■■□□□ 1.1
HLA-DQB2P05538 SMUG1P1-201ENST00000590640 811 ntBASIC21.95■■□□□ 1.1
HLA-DQB2P05538 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQB2P05538 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQB2P05538 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQB2P05538 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 LINC00565-201ENST00000562710 2331 ntBASIC21.93■■□□□ 1.1
HLA-DQB2P05538 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
HLA-DQB2P05538 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HLA-DQB2P05538 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQB2P05538 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HLA-DQB2P05538 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQB2P05538 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms