Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 DUX4L16-201ENST00000555130 1264 ntBASIC23.69■■□□□ 1.38
CHRNA1P02708 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.69■■□□□ 1.38
CHRNA1P02708 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.69■■□□□ 1.38
CHRNA1P02708 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.69■■□□□ 1.38
CHRNA1P02708 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNA1P02708 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNA1P02708 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CHRNA1P02708 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNA1P02708 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CHRNA1P02708 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNA1P02708 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.68■■□□□ 1.38
CHRNA1P02708 GPX1P1-201ENST00000388829 606 ntBASIC23.68■■□□□ 1.38
CHRNA1P02708 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CHRNA1P02708 AP001160.3-201ENST00000601484 763 ntBASIC23.68■■□□□ 1.38
CHRNA1P02708 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.68■■□□□ 1.38
CHRNA1P02708 AL050303.2-201ENST00000619798 666 ntBASIC23.68■■□□□ 1.38
CHRNA1P02708 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CHRNA1P02708 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CHRNA1P02708 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CHRNA1P02708 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.67■■□□□ 1.38
CHRNA1P02708 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.67■■□□□ 1.38
CHRNA1P02708 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CHRNA1P02708 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
CHRNA1P02708 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.66■■□□□ 1.38
CHRNA1P02708 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.66■■□□□ 1.38
CHRNA1P02708 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.66■■□□□ 1.38
CHRNA1P02708 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.66■■□□□ 1.38
CHRNA1P02708 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
CHRNA1P02708 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CHRNA1P02708 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHRNA1P02708 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHRNA1P02708 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CHRNA1P02708 AP004607.7-201ENST00000527152 1677 ntBASIC23.65■■□□□ 1.38
CHRNA1P02708 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHRNA1P02708 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CHRNA1P02708 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHRNA1P02708 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.65■■□□□ 1.38
CHRNA1P02708 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CHRNA1P02708 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.65■■□□□ 1.38
CHRNA1P02708 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHRNA1P02708 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.65■■□□□ 1.38
CHRNA1P02708 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
CHRNA1P02708 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CHRNA1P02708 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHRNA1P02708 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
CHRNA1P02708 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.64■■□□□ 1.38
CHRNA1P02708 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CHRNA1P02708 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHRNA1P02708 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CHRNA1P02708 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.64■■□□□ 1.37
CHRNA1P02708 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.64■■□□□ 1.37
CHRNA1P02708 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
CHRNA1P02708 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.64■■□□□ 1.37
CHRNA1P02708 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.64■■□□□ 1.37
CHRNA1P02708 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.64■■□□□ 1.37
CHRNA1P02708 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHRNA1P02708 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CHRNA1P02708 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.63■■□□□ 1.37
CHRNA1P02708 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHRNA1P02708 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CHRNA1P02708 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHRNA1P02708 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHRNA1P02708 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.63■■□□□ 1.37
CHRNA1P02708 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
CHRNA1P02708 LINC00526-201ENST00000581067 1875 ntBASIC23.63■■□□□ 1.37
CHRNA1P02708 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.63■■□□□ 1.37
CHRNA1P02708 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.63■■□□□ 1.37
CHRNA1P02708 AC231657.2-201ENST00000624556 255 ntBASIC23.63■■□□□ 1.37
CHRNA1P02708 MYCNOS-205ENST00000641950 531 ntBASIC23.63■■□□□ 1.37
CHRNA1P02708 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CHRNA1P02708 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.63■■□□□ 1.37
CHRNA1P02708 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.63■■□□□ 1.37
CHRNA1P02708 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.62■■□□□ 1.37
CHRNA1P02708 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA1P02708 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.62■■□□□ 1.37
CHRNA1P02708 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.62■■□□□ 1.37
CHRNA1P02708 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.62■■□□□ 1.37
CHRNA1P02708 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CHRNA1P02708 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHRNA1P02708 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CHRNA1P02708 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
CHRNA1P02708 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHRNA1P02708 AC083906.2-201ENST00000511578 360 ntBASIC23.61■■□□□ 1.37
CHRNA1P02708 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms