Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CD4P01730 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.01■■□□□ 1.43
CD4P01730 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CD4P01730 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CD4P01730 AC069152.1-201ENST00000438030 544 ntBASIC24.01■■□□□ 1.43
CD4P01730 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
CD4P01730 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.01■■□□□ 1.43
CD4P01730 MIR4651-201ENST00000582622 73 ntBASIC24.01■■□□□ 1.43
CD4P01730 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.01■■□□□ 1.43
CD4P01730 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CD4P01730 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CD4P01730 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CD4P01730 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CD4P01730 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CD4P01730 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CD4P01730 MYCNOS-205ENST00000641950 531 ntBASIC24■■□□□ 1.43
CD4P01730 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC24■■□□□ 1.43
CD4P01730 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24■■□□□ 1.43
CD4P01730 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.99■■□□□ 1.43
CD4P01730 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CD4P01730 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CD4P01730 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CD4P01730 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CD4P01730 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CD4P01730 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CD4P01730 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CD4P01730 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.99■■□□□ 1.43
CD4P01730 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.99■■□□□ 1.43
CD4P01730 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CD4P01730 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.99■■□□□ 1.43
CD4P01730 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
CD4P01730 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CD4P01730 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.98■■□□□ 1.43
CD4P01730 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CD4P01730 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CD4P01730 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.98■■□□□ 1.43
CD4P01730 SLC29A4P1-201ENST00000398760 971 ntBASIC23.98■■□□□ 1.43
CD4P01730 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CD4P01730 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CD4P01730 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.98■■□□□ 1.43
CD4P01730 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.98■■□□□ 1.43
CD4P01730 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CD4P01730 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CD4P01730 DUSP8P3-201ENST00000399571 1760 ntBASIC23.97■■□□□ 1.43
CD4P01730 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.97■■□□□ 1.43
CD4P01730 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CD4P01730 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CD4P01730 AP001160.3-201ENST00000601484 763 ntBASIC23.97■■□□□ 1.43
CD4P01730 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.97■■□□□ 1.43
CD4P01730 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CD4P01730 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CD4P01730 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CD4P01730 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CD4P01730 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.96■■□□□ 1.43
CD4P01730 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CD4P01730 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CD4P01730 AC073210.2-201ENST00000430369 194 ntBASIC23.96■■□□□ 1.43
CD4P01730 CNN2P6-201ENST00000439038 900 ntBASIC23.96■■□□□ 1.43
CD4P01730 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.96■■□□□ 1.43
CD4P01730 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CD4P01730 AC093323.1-202ENST00000635031 2045 ntBASIC23.96■■□□□ 1.43
CD4P01730 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CD4P01730 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CD4P01730 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CD4P01730 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CD4P01730 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
CD4P01730 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CD4P01730 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CD4P01730 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.95■■□□□ 1.42
CD4P01730 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CD4P01730 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CD4P01730 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.95■■□□□ 1.42
CD4P01730 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CD4P01730 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.95■■□□□ 1.42
CD4P01730 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CD4P01730 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.95■■□□□ 1.42
CD4P01730 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CD4P01730 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CD4P01730 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CD4P01730 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CD4P01730 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CD4P01730 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.94■■□□□ 1.42
CD4P01730 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CD4P01730 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.94■■□□□ 1.42
CD4P01730 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
CD4P01730 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.94■■□□□ 1.42
CD4P01730 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CD4P01730 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CD4P01730 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CD4P01730 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.94■■□□□ 1.42
CD4P01730 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CD4P01730 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CD4P01730 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CD4P01730 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CD4P01730 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CD4P01730 AF201337.1-201ENST00000520239 748 ntBASIC23.93■■□□□ 1.42
CD4P01730 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.93■■□□□ 1.42
CD4P01730 AC133552.2-202ENST00000575694 574 ntBASIC23.93■■□□□ 1.42
CD4P01730 AC133041.1-202ENST00000642053 222 ntBASIC23.93■■□□□ 1.42
CD4P01730 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms