Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.02■■□□□ 1.12
PDGFBP01127 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.02■■□□□ 1.12
PDGFBP01127 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.02■■□□□ 1.12
PDGFBP01127 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.02■■□□□ 1.12
PDGFBP01127 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC22.02■■□□□ 1.12
PDGFBP01127 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.02■■□□□ 1.12
PDGFBP01127 AL121749.1-202ENST00000609313 2153 ntBASIC22.02■■□□□ 1.12
PDGFBP01127 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PDGFBP01127 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDGFBP01127 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.01■■□□□ 1.11
PDGFBP01127 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PDGFBP01127 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.01■■□□□ 1.11
PDGFBP01127 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.01■■□□□ 1.11
PDGFBP01127 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.01■■□□□ 1.11
PDGFBP01127 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.01■■□□□ 1.11
PDGFBP01127 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDGFBP01127 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
PDGFBP01127 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDGFBP01127 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDGFBP01127 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDGFBP01127 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
PDGFBP01127 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDGFBP01127 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDGFBP01127 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PDGFBP01127 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22■■□□□ 1.11
PDGFBP01127 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDGFBP01127 AC008550.1-201ENST00000511500 884 ntBASIC22■■□□□ 1.11
PDGFBP01127 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22■■□□□ 1.11
PDGFBP01127 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PDGFBP01127 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22■■□□□ 1.11
PDGFBP01127 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PDGFBP01127 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
PDGFBP01127 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDGFBP01127 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PDGFBP01127 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22■■□□□ 1.11
PDGFBP01127 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDGFBP01127 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.99■■□□□ 1.11
PDGFBP01127 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
PDGFBP01127 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.99■■□□□ 1.11
PDGFBP01127 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.99■■□□□ 1.11
PDGFBP01127 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDGFBP01127 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDGFBP01127 OR10C1-204ENST00000622521 1039 ntBASIC21.99■■□□□ 1.11
PDGFBP01127 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.99■■□□□ 1.11
PDGFBP01127 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PDGFBP01127 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.99■■□□□ 1.11
PDGFBP01127 AC079630.1-202ENST00000618127 1840 ntBASIC21.99■■□□□ 1.11
PDGFBP01127 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFBP01127 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFBP01127 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.98■■□□□ 1.11
PDGFBP01127 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.98■■□□□ 1.11
PDGFBP01127 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.98■■□□□ 1.11
PDGFBP01127 AC097658.1-201ENST00000475555 843 ntBASIC21.98■■□□□ 1.11
PDGFBP01127 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFBP01127 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFBP01127 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFBP01127 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFBP01127 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PDGFBP01127 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
PDGFBP01127 DUSP8P5-201ENST00000422884 1815 ntBASIC21.97■■□□□ 1.11
PDGFBP01127 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFBP01127 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFBP01127 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFBP01127 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFBP01127 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.97■■□□□ 1.11
PDGFBP01127 KRT18P20-201ENST00000548986 1279 ntBASIC21.97■■□□□ 1.11
PDGFBP01127 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
PDGFBP01127 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PDGFBP01127 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFBP01127 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFBP01127 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFBP01127 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PDGFBP01127 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDGFBP01127 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDGFBP01127 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDGFBP01127 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PDGFBP01127 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.96■■□□□ 1.11
PDGFBP01127 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.96■■□□□ 1.11
PDGFBP01127 AC138907.5-202ENST00000569484 235 ntBASIC21.96■■□□□ 1.11
PDGFBP01127 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.96■■□□□ 1.11
PDGFBP01127 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.96■■□□□ 1.11
PDGFBP01127 AC073648.6-201ENST00000641589 218 ntBASIC21.96■■□□□ 1.11
PDGFBP01127 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
PDGFBP01127 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDGFBP01127 AC055733.4-201ENST00000638462 1354 ntBASIC21.96■■□□□ 1.11
PDGFBP01127 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PDGFBP01127 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.96■■□□□ 1.11
PDGFBP01127 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.96■■□□□ 1.11
PDGFBP01127 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.95■■□□□ 1.1
PDGFBP01127 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PDGFBP01127 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.95■■□□□ 1.1
PDGFBP01127 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PDGFBP01127 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.95■■□□□ 1.1
PDGFBP01127 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.95■■□□□ 1.1
PDGFBP01127 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFBP01127 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFBP01127 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.94■■□□□ 1.1
PDGFBP01127 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFBP01127 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PDGFBP01127 AL512625.2-201ENST00000417533 625 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms