Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 OR7E47P-201ENST00000546390 1422 ntBASIC21.4■■□□□ 1.02
SOD1P00441 AC068473.5-201ENST00000616428 2072 ntBASIC21.4■■□□□ 1.02
SOD1P00441 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.4■■□□□ 1.02
SOD1P00441 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.4■■□□□ 1.02
SOD1P00441 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SOD1P00441 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.4■■□□□ 1.02
SOD1P00441 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SOD1P00441 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.4■■□□□ 1.02
SOD1P00441 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOD1P00441 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SOD1P00441 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SOD1P00441 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SOD1P00441 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.39■■□□□ 1.02
SOD1P00441 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOD1P00441 AC080038.3-201ENST00000623346 1952 ntBASIC21.39■■□□□ 1.02
SOD1P00441 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
SOD1P00441 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOD1P00441 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SOD1P00441 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SOD1P00441 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SOD1P00441 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.39■■□□□ 1.01
SOD1P00441 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SOD1P00441 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOD1P00441 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SOD1P00441 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SOD1P00441 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.38■■□□□ 1.01
SOD1P00441 KRT18P5-201ENST00000436075 1291 ntBASIC21.38■■□□□ 1.01
SOD1P00441 KRT18P61-201ENST00000585825 1298 ntBASIC21.38■■□□□ 1.01
SOD1P00441 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SOD1P00441 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SOD1P00441 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SOD1P00441 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SOD1P00441 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.38■■□□□ 1.01
SOD1P00441 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.37■■□□□ 1.01
SOD1P00441 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.37■■□□□ 1.01
SOD1P00441 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.37■■□□□ 1.01
SOD1P00441 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.37■■□□□ 1.01
SOD1P00441 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SOD1P00441 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SOD1P00441 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.37■■□□□ 1.01
SOD1P00441 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.37■■□□□ 1.01
SOD1P00441 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 AC133561.1-201ENST00000568600 2415 ntBASIC21.37■■□□□ 1.01
SOD1P00441 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 AC005224.4-201ENST00000583262 1652 ntBASIC21.37■■□□□ 1.01
SOD1P00441 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.37■■□□□ 1.01
SOD1P00441 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SOD1P00441 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
SOD1P00441 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.36■■□□□ 1.01
SOD1P00441 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.36■■□□□ 1.01
SOD1P00441 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SOD1P00441 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.36■■□□□ 1.01
SOD1P00441 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.36■■□□□ 1.01
SOD1P00441 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.36■■□□□ 1.01
SOD1P00441 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.36■■□□□ 1.01
SOD1P00441 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.36■■□□□ 1.01
SOD1P00441 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SOD1P00441 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SOD1P00441 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.35■■□□□ 1.01
SOD1P00441 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.35■■□□□ 1.01
SOD1P00441 AP004607.7-201ENST00000527152 1677 ntBASIC21.35■■□□□ 1.01
SOD1P00441 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.35■■□□□ 1.01
SOD1P00441 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SOD1P00441 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 AC009237.3-201ENST00000393279 1427 ntBASIC21.35■■□□□ 1.01
SOD1P00441 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.35■■□□□ 1.01
SOD1P00441 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOD1P00441 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms