Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN1O95832 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN1O95832 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLDN1O95832 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN1O95832 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CLDN1O95832 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN1O95832 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN1O95832 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN1O95832 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.28■□□□□ 0.68
CLDN1O95832 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN1O95832 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN1O95832 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN1O95832 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN1O95832 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN1O95832 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN1O95832 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN1O95832 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN1O95832 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.27■□□□□ 0.68
CLDN1O95832 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN1O95832 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN1O95832 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN1O95832 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLDN1O95832 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN1O95832 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN1O95832 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
CLDN1O95832 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.27■□□□□ 0.67
CLDN1O95832 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.67
CLDN1O95832 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLDN1O95832 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 LINC00543-201ENST00000567234 1845 ntBASIC19.26■□□□□ 0.67
CLDN1O95832 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.26■□□□□ 0.67
CLDN1O95832 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.26■□□□□ 0.67
CLDN1O95832 HLA-L-211ENST00000482052 1765 ntBASIC19.26■□□□□ 0.67
CLDN1O95832 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN1O95832 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN1O95832 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN1O95832 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.25■□□□□ 0.67
CLDN1O95832 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN1O95832 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN1O95832 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN1O95832 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN1O95832 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.25■□□□□ 0.67
CLDN1O95832 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDN1O95832 RNA5SP413-201ENST00000516373 109 ntBASIC19.25■□□□□ 0.67
CLDN1O95832 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.25■□□□□ 0.67
CLDN1O95832 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.25■□□□□ 0.67
CLDN1O95832 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN1O95832 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN1O95832 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CLDN1O95832 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDN1O95832 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLDN1O95832 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CLDN1O95832 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN1O95832 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN1O95832 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.24■□□□□ 0.67
CLDN1O95832 AF201337.1-201ENST00000520239 748 ntBASIC19.24■□□□□ 0.67
CLDN1O95832 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.24■□□□□ 0.67
CLDN1O95832 SMUG1P1-201ENST00000590640 811 ntBASIC19.24■□□□□ 0.67
CLDN1O95832 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDN1O95832 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDN1O95832 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN1O95832 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN1O95832 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN1O95832 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN1O95832 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN1O95832 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.23■□□□□ 0.67
CLDN1O95832 AC098590.1-201ENST00000468126 897 ntBASIC19.23■□□□□ 0.67
CLDN1O95832 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN1O95832 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.23■□□□□ 0.67
CLDN1O95832 AC105036.2-201ENST00000569468 176 ntBASIC19.23■□□□□ 0.67
CLDN1O95832 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CLDN1O95832 UBE2DNL-204ENST00000602536 740 ntBASIC19.23■□□□□ 0.67
CLDN1O95832 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN1O95832 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDN1O95832 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN1O95832 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDN1O95832 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDN1O95832 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDN1O95832 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.22■□□□□ 0.67
CLDN1O95832 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms