Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT4O95628 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT4O95628 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT4O95628 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 AC079089.2-201ENST00000531211 1277 ntBASIC19.13■□□□□ 0.65
CNOT4O95628 SMUG1P1-201ENST00000590640 811 ntBASIC19.13■□□□□ 0.65
CNOT4O95628 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT4O95628 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNOT4O95628 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT4O95628 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CNOT4O95628 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT4O95628 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT4O95628 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CNOT4O95628 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CNOT4O95628 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CNOT4O95628 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CNOT4O95628 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT4O95628 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT4O95628 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CNOT4O95628 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CNOT4O95628 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CNOT4O95628 BX005040.4-201ENST00000637145 1518 ntBASIC19.12■□□□□ 0.65
CNOT4O95628 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CNOT4O95628 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 LINC02228-203ENST00000641970 1355 ntBASIC19.12■□□□□ 0.65
CNOT4O95628 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.12■□□□□ 0.65
CNOT4O95628 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.12■□□□□ 0.65
CNOT4O95628 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT4O95628 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CNOT4O95628 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT4O95628 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT4O95628 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 AC022517.1-201ENST00000592429 346 ntBASIC19.11■□□□□ 0.65
CNOT4O95628 AL137784.2-201ENST00000607332 1000 ntBASIC19.11■□□□□ 0.65
CNOT4O95628 IKBKGP1-201ENST00000612193 1073 ntBASIC19.11■□□□□ 0.65
CNOT4O95628 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CNOT4O95628 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CNOT4O95628 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT4O95628 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT4O95628 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT4O95628 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT4O95628 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CNOT4O95628 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT4O95628 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.1■□□□□ 0.65
CNOT4O95628 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT4O95628 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CNOT4O95628 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT4O95628 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.1■□□□□ 0.65
CNOT4O95628 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT4O95628 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT4O95628 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.1■□□□□ 0.65
CNOT4O95628 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT4O95628 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT4O95628 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT4O95628 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CNOT4O95628 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT4O95628 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT4O95628 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT4O95628 ESRRAP2-201ENST00000418437 1549 ntBASIC19.1■□□□□ 0.65
CNOT4O95628 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT4O95628 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CNOT4O95628 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT4O95628 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT4O95628 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT4O95628 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT4O95628 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CNOT4O95628 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CNOT4O95628 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.09■□□□□ 0.65
CNOT4O95628 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CNOT4O95628 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.09■□□□□ 0.65
CNOT4O95628 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT4O95628 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.09■□□□□ 0.65
CNOT4O95628 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CNOT4O95628 MIR6084-201ENST00000622012 110 ntBASIC19.09■□□□□ 0.65
CNOT4O95628 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT4O95628 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT4O95628 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT4O95628 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms