Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 AF213884.3-201ENST00000563833 479 ntBASIC20.02■□□□□ 0.8
NKX2-2O95096 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.02■□□□□ 0.8
NKX2-2O95096 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NKX2-2O95096 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-2O95096 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
NKX2-2O95096 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.02■□□□□ 0.79
NKX2-2O95096 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NKX2-2O95096 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NKX2-2O95096 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-2O95096 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NKX2-2O95096 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-2O95096 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.01■□□□□ 0.79
NKX2-2O95096 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-2O95096 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.01■□□□□ 0.79
NKX2-2O95096 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.01■□□□□ 0.79
NKX2-2O95096 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NKX2-2O95096 AL136967.2-201ENST00000623968 743 ntBASIC20.01■□□□□ 0.79
NKX2-2O95096 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.01■□□□□ 0.79
NKX2-2O95096 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-2O95096 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-2O95096 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-2O95096 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
NKX2-2O95096 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NKX2-2O95096 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
NKX2-2O95096 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20■□□□□ 0.79
NKX2-2O95096 RASA4CP-201ENST00000424092 1398 ntBASIC20■□□□□ 0.79
NKX2-2O95096 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 SUDS3P1-201ENST00000505831 966 ntBASIC20■□□□□ 0.79
NKX2-2O95096 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20■□□□□ 0.79
NKX2-2O95096 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20■□□□□ 0.79
NKX2-2O95096 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20■□□□□ 0.79
NKX2-2O95096 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20■□□□□ 0.79
NKX2-2O95096 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-2O95096 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-2O95096 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.99■□□□□ 0.79
NKX2-2O95096 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.99■□□□□ 0.79
NKX2-2O95096 AC091305.1-201ENST00000479476 895 ntBASIC19.99■□□□□ 0.79
NKX2-2O95096 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-2O95096 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NKX2-2O95096 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.99■□□□□ 0.79
NKX2-2O95096 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-2O95096 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
NKX2-2O95096 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-2O95096 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-2O95096 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-2O95096 FAM99A-202ENST00000538190 1989 ntBASIC19.98■□□□□ 0.79
NKX2-2O95096 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-2O95096 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-2O95096 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.98■□□□□ 0.79
NKX2-2O95096 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.98■□□□□ 0.79
NKX2-2O95096 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-2O95096 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-2O95096 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-2O95096 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NKX2-2O95096 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NKX2-2O95096 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
NKX2-2O95096 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-2O95096 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-2O95096 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-2O95096 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.97■□□□□ 0.79
NKX2-2O95096 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
NKX2-2O95096 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-2O95096 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-2O95096 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-2O95096 TSPY26P-201ENST00000476365 1326 ntBASIC19.97■□□□□ 0.79
NKX2-2O95096 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-2O95096 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.96■□□□□ 0.79
NKX2-2O95096 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-2O95096 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-2O95096 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-2O95096 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-2O95096 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-2O95096 SMUG1P1-201ENST00000590640 811 ntBASIC19.96■□□□□ 0.79
NKX2-2O95096 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.96■□□□□ 0.79
NKX2-2O95096 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-2O95096 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-2O95096 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.96■□□□□ 0.79
NKX2-2O95096 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-2O95096 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms