Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNRNP200O75643 AP004607.7-201ENST00000527152 1677 ntBASIC20.78■□□□□ 0.92
SNRNP200O75643 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
SNRNP200O75643 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNRNP200O75643 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP200O75643 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP200O75643 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP200O75643 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP200O75643 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
SNRNP200O75643 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP200O75643 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP200O75643 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNRNP200O75643 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNRNP200O75643 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNRNP200O75643 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.77■□□□□ 0.91
SNRNP200O75643 AL034346.1-201ENST00000568244 1277 ntBASIC20.77■□□□□ 0.91
SNRNP200O75643 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.77■□□□□ 0.91
SNRNP200O75643 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.77■□□□□ 0.91
SNRNP200O75643 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.77■□□□□ 0.91
SNRNP200O75643 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNRNP200O75643 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.76■□□□□ 0.91
SNRNP200O75643 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP200O75643 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP200O75643 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP200O75643 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP200O75643 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP200O75643 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP200O75643 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.76■□□□□ 0.91
SNRNP200O75643 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SNRNP200O75643 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.76■□□□□ 0.91
SNRNP200O75643 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP200O75643 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SNRNP200O75643 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.76■□□□□ 0.91
SNRNP200O75643 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.76■□□□□ 0.91
SNRNP200O75643 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNRNP200O75643 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRNP200O75643 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRNP200O75643 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRNP200O75643 KRT18P5-201ENST00000436075 1291 ntBASIC20.75■□□□□ 0.91
SNRNP200O75643 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SNRNP200O75643 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRNP200O75643 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.75■□□□□ 0.91
SNRNP200O75643 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.75■□□□□ 0.91
SNRNP200O75643 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNRNP200O75643 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNRNP200O75643 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.75■□□□□ 0.91
SNRNP200O75643 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.75■□□□□ 0.91
SNRNP200O75643 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.75■□□□□ 0.91
SNRNP200O75643 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SNRNP200O75643 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SNRNP200O75643 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP200O75643 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP200O75643 AC012676.1-201ENST00000574705 1949 ntBASIC20.74■□□□□ 0.91
SNRNP200O75643 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP200O75643 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.74■□□□□ 0.91
SNRNP200O75643 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.74■□□□□ 0.91
SNRNP200O75643 KRT18P61-201ENST00000585825 1298 ntBASIC20.74■□□□□ 0.91
SNRNP200O75643 MIR5787-201ENST00000611784 55 ntBASIC20.74■□□□□ 0.91
SNRNP200O75643 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.74■□□□□ 0.91
SNRNP200O75643 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP200O75643 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP200O75643 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SNRNP200O75643 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP200O75643 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP200O75643 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNRNP200O75643 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.74■□□□□ 0.91
SNRNP200O75643 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.73■□□□□ 0.91
SNRNP200O75643 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP200O75643 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP200O75643 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.73■□□□□ 0.91
SNRNP200O75643 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP200O75643 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.73■□□□□ 0.91
SNRNP200O75643 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SNRNP200O75643 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP200O75643 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP200O75643 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP200O75643 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP200O75643 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SNRNP200O75643 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.72■□□□□ 0.91
SNRNP200O75643 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.72■□□□□ 0.91
SNRNP200O75643 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SNRNP200O75643 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.72■□□□□ 0.91
SNRNP200O75643 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.72■□□□□ 0.91
SNRNP200O75643 IKBKGP1-201ENST00000612193 1073 ntBASIC20.72■□□□□ 0.91
SNRNP200O75643 ESRRAP2-201ENST00000418437 1549 ntBASIC20.72■□□□□ 0.91
SNRNP200O75643 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SNRNP200O75643 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms