Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.23■□□□□ 0.51
PDCD6O75340 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD6O75340 AC079089.2-201ENST00000531211 1277 ntBASIC18.23■□□□□ 0.51
PDCD6O75340 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.23■□□□□ 0.51
PDCD6O75340 pRNA.6-201ENST00000610482 90 ntBASIC18.23■□□□□ 0.51
PDCD6O75340 pRNA.5-201ENST00000612139 90 ntBASIC18.23■□□□□ 0.51
PDCD6O75340 pRNA.11-201ENST00000618423 90 ntBASIC18.23■□□□□ 0.51
PDCD6O75340 pRNA.13-201ENST00000619112 90 ntBASIC18.23■□□□□ 0.51
PDCD6O75340 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD6O75340 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD6O75340 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD6O75340 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PDCD6O75340 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.23■□□□□ 0.51
PDCD6O75340 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDCD6O75340 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDCD6O75340 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDCD6O75340 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD6O75340 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.22■□□□□ 0.51
PDCD6O75340 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD6O75340 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD6O75340 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PDCD6O75340 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD6O75340 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD6O75340 AC006455.2-201ENST00000429931 906 ntBASIC18.22■□□□□ 0.51
PDCD6O75340 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.22■□□□□ 0.51
PDCD6O75340 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD6O75340 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.22■□□□□ 0.51
PDCD6O75340 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDCD6O75340 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.22■□□□□ 0.51
PDCD6O75340 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.22■□□□□ 0.51
PDCD6O75340 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDCD6O75340 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.21■□□□□ 0.51
PDCD6O75340 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.21■□□□□ 0.51
PDCD6O75340 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.21■□□□□ 0.51
PDCD6O75340 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.21■□□□□ 0.51
PDCD6O75340 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDCD6O75340 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PDCD6O75340 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDCD6O75340 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PDCD6O75340 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.2■□□□□ 0.5
PDCD6O75340 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PDCD6O75340 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.2■□□□□ 0.5
PDCD6O75340 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDCD6O75340 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.2■□□□□ 0.5
PDCD6O75340 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.19■□□□□ 0.5
PDCD6O75340 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.19■□□□□ 0.5
PDCD6O75340 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.19■□□□□ 0.5
PDCD6O75340 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.19■□□□□ 0.5
PDCD6O75340 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.19■□□□□ 0.5
PDCD6O75340 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 AL356740.2-201ENST00000601559 647 ntBASIC18.19■□□□□ 0.5
PDCD6O75340 AC099791.2-201ENST00000605725 427 ntBASIC18.19■□□□□ 0.5
PDCD6O75340 AC068587.7-201ENST00000641602 218 ntBASIC18.19■□□□□ 0.5
PDCD6O75340 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.19■□□□□ 0.5
PDCD6O75340 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PDCD6O75340 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDCD6O75340 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD6O75340 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PDCD6O75340 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD6O75340 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD6O75340 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.18■□□□□ 0.5
PDCD6O75340 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.18■□□□□ 0.5
PDCD6O75340 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
PDCD6O75340 OR7E47P-201ENST00000546390 1422 ntBASIC18.18■□□□□ 0.5
PDCD6O75340 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDCD6O75340 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms