Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZFC3H1O60293 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZFC3H1O60293 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
ZFC3H1O60293 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ZFC3H1O60293 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZFC3H1O60293 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.43■■□□□ 1.02
ZFC3H1O60293 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
ZFC3H1O60293 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.42■■□□□ 1.02
ZFC3H1O60293 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.42■■□□□ 1.02
ZFC3H1O60293 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.42■■□□□ 1.02
ZFC3H1O60293 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
ZFC3H1O60293 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZFC3H1O60293 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 KRT18P5-201ENST00000436075 1291 ntBASIC21.41■■□□□ 1.02
ZFC3H1O60293 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.41■■□□□ 1.02
ZFC3H1O60293 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.41■■□□□ 1.02
ZFC3H1O60293 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.41■■□□□ 1.02
ZFC3H1O60293 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.41■■□□□ 1.02
ZFC3H1O60293 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.41■■□□□ 1.02
ZFC3H1O60293 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZFC3H1O60293 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.4■■□□□ 1.02
ZFC3H1O60293 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
ZFC3H1O60293 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZFC3H1O60293 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZFC3H1O60293 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.4■■□□□ 1.02
ZFC3H1O60293 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.4■■□□□ 1.02
ZFC3H1O60293 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZFC3H1O60293 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ZFC3H1O60293 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
ZFC3H1O60293 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
ZFC3H1O60293 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.39■■□□□ 1.02
ZFC3H1O60293 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.02
ZFC3H1O60293 MIR6084-201ENST00000622012 110 ntBASIC21.39■■□□□ 1.02
ZFC3H1O60293 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
ZFC3H1O60293 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZFC3H1O60293 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZFC3H1O60293 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZFC3H1O60293 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZFC3H1O60293 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
ZFC3H1O60293 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZFC3H1O60293 CCDC92B-201ENST00000575506 885 ntBASIC21.39■■□□□ 1.01
ZFC3H1O60293 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
ZFC3H1O60293 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ZFC3H1O60293 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZFC3H1O60293 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ZFC3H1O60293 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ZFC3H1O60293 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.38■■□□□ 1.01
ZFC3H1O60293 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZFC3H1O60293 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ZFC3H1O60293 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ZFC3H1O60293 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.38■■□□□ 1.01
ZFC3H1O60293 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZFC3H1O60293 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.38■■□□□ 1.01
ZFC3H1O60293 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.38■■□□□ 1.01
ZFC3H1O60293 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.38■■□□□ 1.01
ZFC3H1O60293 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZFC3H1O60293 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZFC3H1O60293 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ZFC3H1O60293 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.37■■□□□ 1.01
ZFC3H1O60293 YBX1P1-201ENST00000445822 960 ntBASIC21.37■■□□□ 1.01
ZFC3H1O60293 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 AC090192.1-201ENST00000517740 490 ntBASIC21.37■■□□□ 1.01
ZFC3H1O60293 TERF1P2-201ENST00000583350 1212 ntBASIC21.37■■□□□ 1.01
ZFC3H1O60293 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.37■■□□□ 1.01
ZFC3H1O60293 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
ZFC3H1O60293 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.37■■□□□ 1.01
ZFC3H1O60293 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ZFC3H1O60293 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ZFC3H1O60293 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZFC3H1O60293 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ZFC3H1O60293 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZFC3H1O60293 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ZFC3H1O60293 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms