Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AL157384.1-201ENST00000445995 2473 ntBASIC19.46■□□□□ 0.71
SSX4O60224 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX4O60224 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSX4O60224 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX4O60224 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.45■□□□□ 0.7
SSX4O60224 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.45■□□□□ 0.7
SSX4O60224 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SSX4O60224 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 AC080038.3-201ENST00000623346 1952 ntBASIC19.45■□□□□ 0.7
SSX4O60224 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.45■□□□□ 0.7
SSX4O60224 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX4O60224 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSX4O60224 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX4O60224 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SSX4O60224 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX4O60224 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX4O60224 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX4O60224 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
SSX4O60224 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SSX4O60224 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX4O60224 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX4O60224 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.43■□□□□ 0.7
SSX4O60224 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX4O60224 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.43■□□□□ 0.7
SSX4O60224 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.43■□□□□ 0.7
SSX4O60224 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX4O60224 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX4O60224 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.42■□□□□ 0.7
SSX4O60224 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX4O60224 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SSX4O60224 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX4O60224 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX4O60224 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX4O60224 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX4O60224 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.42■□□□□ 0.7
SSX4O60224 SUDS3P1-201ENST00000505831 966 ntBASIC19.42■□□□□ 0.7
SSX4O60224 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SSX4O60224 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SSX4O60224 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX4O60224 AL355001.2-201ENST00000620617 1191 ntBASIC19.42■□□□□ 0.7
SSX4O60224 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SSX4O60224 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.42■□□□□ 0.7
SSX4O60224 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX4O60224 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX4O60224 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX4O60224 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.41■□□□□ 0.7
SSX4O60224 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSX4O60224 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX4O60224 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSX4O60224 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX4O60224 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX4O60224 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSX4O60224 EDA-201ENST00000338901 1233 ntBASIC19.41■□□□□ 0.7
SSX4O60224 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.41■□□□□ 0.7
SSX4O60224 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.41■□□□□ 0.7
SSX4O60224 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX4O60224 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.41■□□□□ 0.7
SSX4O60224 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.41■□□□□ 0.7
SSX4O60224 DUX4L19-201ENST00000557448 1267 ntBASIC19.41■□□□□ 0.7
SSX4O60224 AL031432.3-201ENST00000607698 485 ntBASIC19.41■□□□□ 0.7
SSX4O60224 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.41■□□□□ 0.7
SSX4O60224 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX4O60224 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SSX4O60224 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX4O60224 FAM99A-202ENST00000538190 1989 ntBASIC19.41■□□□□ 0.7
SSX4O60224 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSX4O60224 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX4O60224 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX4O60224 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX4O60224 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.4■□□□□ 0.7
SSX4O60224 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX4O60224 AC079630.1-202ENST00000618127 1840 ntBASIC19.4■□□□□ 0.7
SSX4O60224 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSX4O60224 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX4O60224 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSX4O60224 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSX4O60224 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms