Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SOX1O00570 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.39■■□□□ 1.33
SOX1O00570 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.39■■□□□ 1.33
SOX1O00570 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.39■■□□□ 1.33
SOX1O00570 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.39■■□□□ 1.33
SOX1O00570 AC068587.7-201ENST00000641602 218 ntBASIC23.39■■□□□ 1.33
SOX1O00570 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SOX1O00570 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
SOX1O00570 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SOX1O00570 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
SOX1O00570 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SOX1O00570 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SOX1O00570 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.38■■□□□ 1.33
SOX1O00570 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.38■■□□□ 1.33
SOX1O00570 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.38■■□□□ 1.33
SOX1O00570 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.38■■□□□ 1.33
SOX1O00570 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
SOX1O00570 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
SOX1O00570 AC008694.1-202ENST00000636953 945 ntBASIC23.38■■□□□ 1.33
SOX1O00570 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SOX1O00570 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
SOX1O00570 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.37■■□□□ 1.33
SOX1O00570 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.37■■□□□ 1.33
SOX1O00570 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.37■■□□□ 1.33
SOX1O00570 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.37■■□□□ 1.33
SOX1O00570 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.37■■□□□ 1.33
SOX1O00570 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.37■■□□□ 1.33
SOX1O00570 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.37■■□□□ 1.33
SOX1O00570 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.37■■□□□ 1.33
SOX1O00570 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOX1O00570 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SOX1O00570 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.36■■□□□ 1.33
SOX1O00570 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SOX1O00570 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SOX1O00570 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.36■■□□□ 1.33
SOX1O00570 AC008403.3-201ENST00000598924 454 ntBASIC23.36■■□□□ 1.33
SOX1O00570 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SOX1O00570 AC133561.5-201ENST00000635547 218 ntBASIC23.36■■□□□ 1.33
SOX1O00570 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.36■■□□□ 1.33
SOX1O00570 AC144652.1-201ENST00000609974 1624 ntBASIC23.36■■□□□ 1.33
SOX1O00570 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SOX1O00570 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SOX1O00570 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SOX1O00570 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.35■■□□□ 1.33
SOX1O00570 AC010141.2-201ENST00000452426 721 ntBASIC23.35■■□□□ 1.33
SOX1O00570 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SOX1O00570 AC007322.4-201ENST00000509611 723 ntBASIC23.35■■□□□ 1.33
SOX1O00570 C1QBPP2-201ENST00000528754 825 ntBASIC23.35■■□□□ 1.33
SOX1O00570 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.35■■□□□ 1.33
SOX1O00570 AC069236.1-201ENST00000604339 616 ntBASIC23.35■■□□□ 1.33
SOX1O00570 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.35■■□□□ 1.33
SOX1O00570 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SOX1O00570 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SOX1O00570 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SOX1O00570 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.34■■□□□ 1.33
SOX1O00570 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.34■■□□□ 1.33
SOX1O00570 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SOX1O00570 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.34■■□□□ 1.33
SOX1O00570 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.34■■□□□ 1.33
SOX1O00570 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SOX1O00570 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.34■■□□□ 1.33
SOX1O00570 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
SOX1O00570 KRT18P20-201ENST00000548986 1279 ntBASIC23.34■■□□□ 1.33
SOX1O00570 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SOX1O00570 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SOX1O00570 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SOX1O00570 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SOX1O00570 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SOX1O00570 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.33■■□□□ 1.33
SOX1O00570 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.33■■□□□ 1.33
SOX1O00570 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.33■■□□□ 1.33
SOX1O00570 CYP2T3P-201ENST00000601990 817 ntBASIC23.33■■□□□ 1.33
SOX1O00570 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.33■■□□□ 1.33
SOX1O00570 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC23.33■■□□□ 1.33
SOX1O00570 HLA-L-211ENST00000482052 1765 ntBASIC23.32■■□□□ 1.32
SOX1O00570 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SOX1O00570 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SOX1O00570 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SOX1O00570 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SOX1O00570 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SOX1O00570 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SOX1O00570 ARMC10P1-201ENST00000313754 855 ntBASIC23.32■■□□□ 1.32
SOX1O00570 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.32■■□□□ 1.32
SOX1O00570 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.32■■□□□ 1.32
SOX1O00570 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
SOX1O00570 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.32■■□□□ 1.32
SOX1O00570 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.32■■□□□ 1.32
SOX1O00570 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.32■■□□□ 1.32
SOX1O00570 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SOX1O00570 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms