Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.17■□□□□ 0.98
EIF3FO00303 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.17■□□□□ 0.98
EIF3FO00303 AC126544.1-201ENST00000580842 1059 ntBASIC21.17■□□□□ 0.98
EIF3FO00303 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.17■□□□□ 0.98
EIF3FO00303 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.17■□□□□ 0.98
EIF3FO00303 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3FO00303 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.17■□□□□ 0.98
EIF3FO00303 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3FO00303 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.17■□□□□ 0.98
EIF3FO00303 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3FO00303 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
EIF3FO00303 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EIF3FO00303 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3FO00303 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3FO00303 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
EIF3FO00303 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3FO00303 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.16■□□□□ 0.98
EIF3FO00303 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.16■□□□□ 0.98
EIF3FO00303 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3FO00303 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3FO00303 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
EIF3FO00303 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.16■□□□□ 0.98
EIF3FO00303 AP001330.3-201ENST00000520123 633 ntBASIC21.16■□□□□ 0.98
EIF3FO00303 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.16■□□□□ 0.98
EIF3FO00303 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.16■□□□□ 0.98
EIF3FO00303 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.16■□□□□ 0.98
EIF3FO00303 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3FO00303 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EIF3FO00303 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
EIF3FO00303 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
EIF3FO00303 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.15■□□□□ 0.98
EIF3FO00303 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.15■□□□□ 0.98
EIF3FO00303 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.15■□□□□ 0.98
EIF3FO00303 AL139246.5-201ENST00000606645 996 ntBASIC21.15■□□□□ 0.98
EIF3FO00303 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
EIF3FO00303 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.15■□□□□ 0.98
EIF3FO00303 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.15■□□□□ 0.98
EIF3FO00303 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
EIF3FO00303 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
EIF3FO00303 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EIF3FO00303 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EIF3FO00303 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EIF3FO00303 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3FO00303 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3FO00303 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3FO00303 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3FO00303 AC099791.1-201ENST00000416440 715 ntBASIC21.14■□□□□ 0.97
EIF3FO00303 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.14■□□□□ 0.97
EIF3FO00303 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3FO00303 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.14■□□□□ 0.97
EIF3FO00303 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EIF3FO00303 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3FO00303 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.13■□□□□ 0.97
EIF3FO00303 RASA4CP-201ENST00000424092 1398 ntBASIC21.13■□□□□ 0.97
EIF3FO00303 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3FO00303 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
EIF3FO00303 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3FO00303 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3FO00303 MIR939-201ENST00000401314 82 ntBASIC21.13■□□□□ 0.97
EIF3FO00303 AC091305.1-201ENST00000479476 895 ntBASIC21.13■□□□□ 0.97
EIF3FO00303 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.13■□□□□ 0.97
EIF3FO00303 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
EIF3FO00303 AC008764.7-201ENST00000593779 1081 ntBASIC21.13■□□□□ 0.97
EIF3FO00303 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.13■□□□□ 0.97
EIF3FO00303 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3FO00303 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3FO00303 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.13■□□□□ 0.97
EIF3FO00303 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.13■□□□□ 0.97
EIF3FO00303 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3FO00303 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EIF3FO00303 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3FO00303 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3FO00303 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3FO00303 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.12■□□□□ 0.97
EIF3FO00303 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.12■□□□□ 0.97
EIF3FO00303 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.12■□□□□ 0.97
EIF3FO00303 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.12■□□□□ 0.97
EIF3FO00303 AL031432.3-201ENST00000607698 485 ntBASIC21.12■□□□□ 0.97
EIF3FO00303 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3FO00303 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
EIF3FO00303 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3FO00303 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3FO00303 FAM99A-202ENST00000538190 1989 ntBASIC21.12■□□□□ 0.97
EIF3FO00303 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3FO00303 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EIF3FO00303 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
EIF3FO00303 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms