Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
H3BM21 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.52■■□□□ 1.04
H3BM21 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.52■■□□□ 1.04
H3BM21 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.52■■□□□ 1.04
H3BM21 AC092437.1-201ENST00000624794 1048 ntBASIC21.52■■□□□ 1.04
H3BM21 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.52■■□□□ 1.04
H3BM21 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
H3BM21 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.52■■□□□ 1.04
H3BM21 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
H3BM21 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H3BM21 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
H3BM21 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.52■■□□□ 1.03
H3BM21 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
H3BM21 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
H3BM21 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.51■■□□□ 1.03
H3BM21 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
H3BM21 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
H3BM21 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 AC004911.1-201ENST00000416316 871 ntBASIC21.51■■□□□ 1.03
H3BM21 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.51■■□□□ 1.03
H3BM21 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.51■■□□□ 1.03
H3BM21 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
H3BM21 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
H3BM21 BX005040.4-201ENST00000637145 1518 ntBASIC21.5■■□□□ 1.03
H3BM21 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
H3BM21 LINC01960-201ENST00000563759 1884 ntBASIC21.5■■□□□ 1.03
H3BM21 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
H3BM21 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.5■■□□□ 1.03
H3BM21 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H3BM21 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
H3BM21 C1orf229-201ENST00000623686 2258 ntBASIC21.5■■□□□ 1.03
H3BM21 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
H3BM21 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.5■■□□□ 1.03
H3BM21 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.5■■□□□ 1.03
H3BM21 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H3BM21 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H3BM21 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
H3BM21 AC068473.5-201ENST00000616428 2072 ntBASIC21.49■■□□□ 1.03
H3BM21 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
H3BM21 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H3BM21 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H3BM21 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H3BM21 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
H3BM21 TPRG1LP1-201ENST00000598702 760 ntBASIC21.49■■□□□ 1.03
H3BM21 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.49■■□□□ 1.03
H3BM21 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
H3BM21 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.49■■□□□ 1.03
H3BM21 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
H3BM21 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
H3BM21 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.49■■□□□ 1.03
H3BM21 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
H3BM21 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
H3BM21 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.48■■□□□ 1.03
H3BM21 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H3BM21 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
H3BM21 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.48■■□□□ 1.03
H3BM21 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
H3BM21 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.48■■□□□ 1.03
H3BM21 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
H3BM21 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
H3BM21 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.48■■□□□ 1.03
H3BM21 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.48■■□□□ 1.03
H3BM21 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.48■■□□□ 1.03
H3BM21 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
H3BM21 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.48■■□□□ 1.03
H3BM21 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
H3BM21 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
H3BM21 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
H3BM21 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H3BM21 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.47■■□□□ 1.03
H3BM21 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.47■■□□□ 1.03
H3BM21 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.47■■□□□ 1.03
H3BM21 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H3BM21 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
H3BM21 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
H3BM21 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.46■■□□□ 1.03
H3BM21 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H3BM21 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
H3BM21 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H3BM21 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.46■■□□□ 1.03
H3BM21 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.46■■□□□ 1.03
H3BM21 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
H3BM21 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
H3BM21 OXCT2P1-201ENST00000447263 1535 ntBASIC21.45■■□□□ 1.02
H3BM21 AC012676.1-201ENST00000574705 1949 ntBASIC21.45■■□□□ 1.02
H3BM21 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
H3BM21 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H3BM21 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.45■■□□□ 1.02
H3BM21 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H3BM21 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
H3BM21 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
H3BM21 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
H3BM21 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms