Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 MIR638-201ENST00000385237 100 ntBASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.28■□□□□ 0.84
PRAMEF25A6NGN4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
PRAMEF25A6NGN4 AC004687.1-201ENST00000579003 1625 ntBASIC20.27■□□□□ 0.83
PRAMEF25A6NGN4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PRAMEF25A6NGN4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
PRAMEF25A6NGN4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.27■□□□□ 0.83
PRAMEF25A6NGN4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.27■□□□□ 0.83
PRAMEF25A6NGN4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 FAM99A-202ENST00000538190 1989 ntBASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PRAMEF25A6NGN4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 AL355001.2-201ENST00000620617 1191 ntBASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
PRAMEF25A6NGN4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 OR2I1P-207ENST00000453522 948 ntBASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 AC005837.3-201ENST00000612163 286 ntBASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PRAMEF25A6NGN4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 AP001330.3-201ENST00000520123 633 ntBASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 AL031432.3-201ENST00000607698 485 ntBASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PRAMEF25A6NGN4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 SLC47A1P1-202ENST00000449666 945 ntBASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 AF213884.3-201ENST00000563833 479 ntBASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 AC142381.2-201ENST00000566120 298 ntBASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PRAMEF25A6NGN4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms