Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43BA6NCK2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM43BA6NCK2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43BA6NCK2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43BA6NCK2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM43BA6NCK2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM43BA6NCK2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43BA6NCK2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43BA6NCK2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43BA6NCK2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TRIM43BA6NCK2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM43BA6NCK2 GCSHP5-201ENST00000443090 522 ntBASIC23.8■■□□□ 1.4
TRIM43BA6NCK2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM43BA6NCK2 AC068338.2-201ENST00000563278 1430 ntBASIC23.8■■□□□ 1.4
TRIM43BA6NCK2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TRIM43BA6NCK2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TRIM43BA6NCK2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM43BA6NCK2 MKRN4P-201ENST00000444706 1521 ntBASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 RARRES2P4-201ENST00000514074 484 ntBASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 AP006294.2-201ENST00000641667 209 ntBASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43BA6NCK2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 AC055733.4-201ENST00000638462 1354 ntBASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 AL596275.1-201ENST00000423464 877 ntBASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 CYP2T1P-201ENST00000432607 1285 ntBASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 AC010141.2-201ENST00000452426 721 ntBASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43BA6NCK2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 KRT18P20-201ENST00000548986 1279 ntBASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 AC013268.1-206ENST00000638368 961 ntBASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 AC112229.1-201ENST00000639295 961 ntBASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43BA6NCK2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 DUSP8P3-201ENST00000399571 1760 ntBASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 DUSP8P5-201ENST00000422884 1815 ntBASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 TERF1P5-201ENST00000477545 1207 ntBASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 AC138907.5-202ENST00000569484 235 ntBASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43BA6NCK2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIM43BA6NCK2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TRIM43BA6NCK2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM43BA6NCK2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.74■■□□□ 1.39
TRIM43BA6NCK2 AC093787.1-201ENST00000450396 207 ntBASIC23.74■■□□□ 1.39
TRIM43BA6NCK2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIM43BA6NCK2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.74■■□□□ 1.39
TRIM43BA6NCK2 AC083880.1-201ENST00000608266 535 ntBASIC23.74■■□□□ 1.39
TRIM43BA6NCK2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.74■■□□□ 1.39
TRIM43BA6NCK2 AC092118.2-201ENST00000613495 667 ntBASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms