Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TCRBV9S1A1TA0A576 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 AC006455.2-201ENST00000429931 906 ntBASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 AC079089.2-201ENST00000531211 1277 ntBASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 AC026471.6-201ENST00000622954 1905 ntBASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TCRBV9S1A1TA0A576 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.75■■□□□ 1.07
TCRBV9S1A1TA0A576 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 pRNA.6-201ENST00000610482 90 ntBASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 pRNA.5-201ENST00000612139 90 ntBASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 pRNA.11-201ENST00000618423 90 ntBASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 pRNA.13-201ENST00000619112 90 ntBASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.74■■□□□ 1.07
TCRBV9S1A1TA0A576 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.73■■□□□ 1.07
TCRBV9S1A1TA0A576 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 AF106564.1-201ENST00000607058 2553 ntBASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TCRBV9S1A1TA0A576 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 FEM1AP4-201ENST00000443167 1987 ntBASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TCRBV9S1A1TA0A576 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TCRBV9S1A1TA0A576 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TCRBV9S1A1TA0A576 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TCRBV9S1A1TA0A576 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TCRBV9S1A1TA0A576 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms