Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC087742.1-201ENST00000575880 1738 ntBASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 OR7E47P-201ENST00000546390 1422 ntBASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CENPVL3A0A0U1RRI6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 LINC00526-201ENST00000581067 1875 ntBASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CENPVL3A0A0U1RRI6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 AP004607.7-201ENST00000527152 1677 ntBASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CENPVL3A0A0U1RRI6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPVL3A0A0U1RRI6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CENPVL3A0A0U1RRI6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.52■□□□□ 0.4
CENPVL3A0A0U1RRI6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.52■□□□□ 0.4
CENPVL3A0A0U1RRI6 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.52■□□□□ 0.4
CENPVL3A0A0U1RRI6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CENPVL3A0A0U1RRI6 RARRES2P11-201ENST00000635158 484 ntBASIC17.52■□□□□ 0.4
CENPVL3A0A0U1RRI6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CENPVL3A0A0U1RRI6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPVL3A0A0U1RRI6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPVL3A0A0U1RRI6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.52■□□□□ 0.39
CENPVL3A0A0U1RRI6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.52■□□□□ 0.39
CENPVL3A0A0U1RRI6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CENPVL3A0A0U1RRI6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC137767.1-201ENST00000602918 1920 ntBASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 KRT19P1-201ENST00000405746 1186 ntBASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC137761.2-201ENST00000561729 223 ntBASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC145350.3-201ENST00000569033 163 ntBASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CENPVL3A0A0U1RRI6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CENPVL3A0A0U1RRI6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC016769.1-201ENST00000409132 1010 ntBASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC090192.1-201ENST00000517740 490 ntBASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 AC055733.4-201ENST00000638462 1354 ntBASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CENPVL3A0A0U1RRI6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms