Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 AC079089.2-201ENST00000531211 1277 ntBASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV6-1A0A0K0K1D8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV6-1A0A0K0K1D8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 AL499627.2-201ENST00000606283 725 ntBASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV6-1A0A0K0K1D8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.14■□□□□ 0.18
TRBV6-1A0A0K0K1D8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TRBV6-1A0A0K0K1D8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC009102.2-201ENST00000606772 1639 ntBASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AL031602.1-201ENST00000633169 911 ntBASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AL157384.1-201ENST00000445995 2473 ntBASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-1A0A0K0K1D8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC092667.1-201ENST00000434301 2586 ntBASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC010980.1-201ENST00000587192 1142 ntBASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms