Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.04■□□□□ 0.16
TRAV21A0A0B4J279 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 AC244015.2-201ENST00000616358 1861 ntBASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 AL499627.2-201ENST00000606283 725 ntBASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV21A0A0B4J279 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV21A0A0B4J279 AC026310.3-201ENST00000625186 2373 ntBASIC16.02■□□□□ 0.15
TRAV21A0A0B4J279 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.02■□□□□ 0.15
TRAV21A0A0B4J279 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.02■□□□□ 0.15
TRAV21A0A0B4J279 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TRAV21A0A0B4J279 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 TSPY9P-201ENST00000440215 945 ntBASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 TSPY11P-201ENST00000442607 1045 ntBASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 AC239859.2-201ENST00000444165 318 ntBASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV21A0A0B4J279 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 AL117332.1-201ENST00000622628 974 ntBASIC16■□□□□ 0.15
TRAV21A0A0B4J279 AC241377.3-202ENST00000626088 1088 ntBASIC16■□□□□ 0.15
TRAV21A0A0B4J279 AC241585.3-202ENST00000628937 1088 ntBASIC16■□□□□ 0.15
TRAV21A0A0B4J279 AC245100.8-202ENST00000629247 1058 ntBASIC16■□□□□ 0.15
TRAV21A0A0B4J279 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV21A0A0B4J279 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV21A0A0B4J279 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms