Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRAV39A0A0B4J263 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV39A0A0B4J263 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV39A0A0B4J263 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV39A0A0B4J263 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV39A0A0B4J263 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV39A0A0B4J263 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
TRAV39A0A0B4J263 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV39A0A0B4J263 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV39A0A0B4J263 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV39A0A0B4J263 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV39A0A0B4J263 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 SERBP1P1-201ENST00000396021 1160 ntBASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 AC010542.4-201ENST00000563151 1910 ntBASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV39A0A0B4J263 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 AL031602.1-201ENST00000633169 911 ntBASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV39A0A0B4J263 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 FAM99A-202ENST00000538190 1989 ntBASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV39A0A0B4J263 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 SYT6-210ENST00000641643 1587 ntBASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
TRAV39A0A0B4J263 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV39A0A0B4J263 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms