Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 MIR3621-201ENST00000580529 85 ntBASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AL117332.1-201ENST00000622628 974 ntBASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AC080038.3-201ENST00000623346 1952 ntBASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AC131212.1-201ENST00000613771 668 ntBASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 AC079630.1-202ENST00000618127 1840 ntBASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-3A0A0A6YYJ7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 AC026310.3-201ENST00000625186 2373 ntBASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms