Protein–RNA interactions for Protein: Q8BG30

Nelfa, Negative elongation factor A, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NelfaQ8BG30 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NelfaQ8BG30 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NelfaQ8BG30 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NelfaQ8BG30 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
NelfaQ8BG30 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NelfaQ8BG30 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NelfaQ8BG30 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
NelfaQ8BG30 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NelfaQ8BG30 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NelfaQ8BG30 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
NelfaQ8BG30 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NelfaQ8BG30 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
NelfaQ8BG30 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.34■■□□□ 1.17
NelfaQ8BG30 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NelfaQ8BG30 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NelfaQ8BG30 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NelfaQ8BG30 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NelfaQ8BG30 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
NelfaQ8BG30 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NelfaQ8BG30 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.32■■□□□ 1.16
NelfaQ8BG30 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NelfaQ8BG30 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.3■■□□□ 1.16
NelfaQ8BG30 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
NelfaQ8BG30 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NelfaQ8BG30 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NelfaQ8BG30 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
NelfaQ8BG30 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NelfaQ8BG30 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NelfaQ8BG30 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
NelfaQ8BG30 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NelfaQ8BG30 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.26■■□□□ 1.15
NelfaQ8BG30 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NelfaQ8BG30 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NelfaQ8BG30 Gm9397-201ENSMUST00000200125 605 ntBASIC22.26■■□□□ 1.15
NelfaQ8BG30 Gm45855-201ENSMUST00000212546 880 ntBASIC22.26■■□□□ 1.15
NelfaQ8BG30 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NelfaQ8BG30 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NelfaQ8BG30 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NelfaQ8BG30 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfaQ8BG30 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.25■■□□□ 1.15
NelfaQ8BG30 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NelfaQ8BG30 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NelfaQ8BG30 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
NelfaQ8BG30 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.21■■□□□ 1.15
NelfaQ8BG30 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.2■■□□□ 1.14
NelfaQ8BG30 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NelfaQ8BG30 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NelfaQ8BG30 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.2■■□□□ 1.14
NelfaQ8BG30 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
NelfaQ8BG30 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.18■■□□□ 1.14
NelfaQ8BG30 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NelfaQ8BG30 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NelfaQ8BG30 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NelfaQ8BG30 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NelfaQ8BG30 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NelfaQ8BG30 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NelfaQ8BG30 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
NelfaQ8BG30 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NelfaQ8BG30 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NelfaQ8BG30 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NelfaQ8BG30 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.14■■□□□ 1.13
NelfaQ8BG30 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NelfaQ8BG30 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NelfaQ8BG30 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NelfaQ8BG30 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NelfaQ8BG30 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NelfaQ8BG30 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
NelfaQ8BG30 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.11■■□□□ 1.13
NelfaQ8BG30 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NelfaQ8BG30 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
NelfaQ8BG30 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NelfaQ8BG30 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.09■■□□□ 1.13
NelfaQ8BG30 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NelfaQ8BG30 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.08■■□□□ 1.13
NelfaQ8BG30 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.08■■□□□ 1.13
NelfaQ8BG30 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NelfaQ8BG30 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.06■■□□□ 1.12
NelfaQ8BG30 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NelfaQ8BG30 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NelfaQ8BG30 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.05■■□□□ 1.12
NelfaQ8BG30 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
NelfaQ8BG30 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NelfaQ8BG30 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NelfaQ8BG30 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NelfaQ8BG30 Gm24970-201ENSMUST00000175582 82 ntBASIC22.03■■□□□ 1.12
NelfaQ8BG30 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
NelfaQ8BG30 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.02■■□□□ 1.12
NelfaQ8BG30 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NelfaQ8BG30 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NelfaQ8BG30 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NelfaQ8BG30 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NelfaQ8BG30 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NelfaQ8BG30 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NelfaQ8BG30 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.99■■□□□ 1.11
NelfaQ8BG30 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NelfaQ8BG30 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
NelfaQ8BG30 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NelfaQ8BG30 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NelfaQ8BG30 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NelfaQ8BG30 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms