Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 YMR209CYMR209C 1374 nt8.36□□□□□ -1.07
SDO1Q07953 SAM35YHR083W 990 nt8.35□□□□□ -1.07
SDO1Q07953 YJL067WYJL067W 351 nt8.35□□□□□ -1.07
SDO1Q07953 UTR1YJR049C 1593 nt8.35□□□□□ -1.07
SDO1Q07953 YPR064WYPR064W 420 nt8.34□□□□□ -1.07
SDO1Q07953 ACO2YJL200C 2370 nt8.34□□□□□ -1.07
SDO1Q07953 NBP35YGL091C 987 nt8.33□□□□□ -1.08
SDO1Q07953 YKL030WYKL030W 606 nt8.33□□□□□ -1.08
SDO1Q07953 SHM2YLR058C 1410 nt8.33□□□□□ -1.08
SDO1Q07953 DAT1YML113W 747 nt8.31□□□□□ -1.08
SDO1Q07953 HIS2YFR025C 1008 nt8.3□□□□□ -1.08
SDO1Q07953 ILV3YJR016C 1758 nt8.3□□□□□ -1.08
SDO1Q07953 TAD3YLR316C 969 nt8.29□□□□□ -1.08
SDO1Q07953 YCR102CYCR102C 1107 nt8.28□□□□□ -1.08
SDO1Q07953 YOR325WYOR325W 474 nt8.28□□□□□ -1.08
SDO1Q07953 TIM17YJL143W 477 nt8.26□□□□□ -1.09
SDO1Q07953 BDH1YAL060W 1149 nt8.25□□□□□ -1.09
SDO1Q07953 YIL100C-AYIL100C-A 339 nt8.24□□□□□ -1.09
SDO1Q07953 COQ8YGL119W 1506 nt8.24□□□□□ -1.09
SDO1Q07953 RSC4YKR008W 1878 nt8.23□□□□□ -1.09
SDO1Q07953 GAP1YKR039W 1809 nt8.22□□□□□ -1.09
SDO1Q07953 THI72YOR192C 1800 nt8.22□□□□□ -1.09
SDO1Q07953 MCM5YLR274W 2328 nt8.21□□□□□ -1.09
SDO1Q07953 YLR415CYLR415C 339 nt8.21□□□□□ -1.1
SDO1Q07953 UGP1YKL035W 1500 nt8.2□□□□□ -1.1
SDO1Q07953 NIT1YIL164C 600 nt8.2□□□□□ -1.1
SDO1Q07953 PSD1YNL169C 1503 nt8.19□□□□□ -1.1
SDO1Q07953 HXT1YHR094C 1713 nt8.18□□□□□ -1.1
SDO1Q07953 FRA1YLL029W 2250 nt8.18□□□□□ -1.1
SDO1Q07953 ARO8YGL202W 1503 nt8.16□□□□□ -1.1
SDO1Q07953 SGT2YOR007C 1041 nt8.16□□□□□ -1.1
SDO1Q07953 CYT1YOR065W 930 nt8.16□□□□□ -1.1
SDO1Q07953 BET2YPR176C 978 nt8.16□□□□□ -1.1
SDO1Q07953 CWC15YDR163W 528 nt8.15□□□□□ -1.1
SDO1Q07953 KES1YPL145C 1305 nt8.14□□□□□ -1.11
SDO1Q07953 SHY1YGR112W 1170 nt8.14□□□□□ -1.11
SDO1Q07953 LSC2YGR244C 1284 nt8.14□□□□□ -1.11
SDO1Q07953 OPI10YOL032W 741 nt8.14□□□□□ -1.11
SDO1Q07953 NRT1YOR071C 1797 nt8.13□□□□□ -1.11
SDO1Q07953 YHL008CYHL008C 1884 nt8.13□□□□□ -1.11
SDO1Q07953 DBP1YPL119C 1854 nt8.13□□□□□ -1.11
SDO1Q07953 YSP3YOR003W 1437 nt8.12□□□□□ -1.11
SDO1Q07953 CCT2YIL142W 1584 nt8.12□□□□□ -1.11
SDO1Q07953 SGA1YIL099W 1650 nt8.11□□□□□ -1.11
SDO1Q07953 PRO1YDR300C 1287 nt8.1□□□□□ -1.11
SDO1Q07953 TIR3YIL011W 810 nt8.1□□□□□ -1.11
SDO1Q07953 RTG1YOL067C 534 nt8.1□□□□□ -1.11
SDO1Q07953 MRP20YDR405W 792 nt8.09□□□□□ -1.11
SDO1Q07953 tL(GAG)GtL(GAG)G 82 nt8.08□□□□□ -1.12
SDO1Q07953 MAS1YLR163C 1389 nt8.08□□□□□ -1.12
SDO1Q07953 DMA2YNL116W 1569 nt8.07□□□□□ -1.12
SDO1Q07953 ATG15YCR068W 1563 nt8.06□□□□□ -1.12
SDO1Q07953 RSC8YFR037C 1674 nt8.05□□□□□ -1.12
SDO1Q07953 SHH4YLR164W 507 nt8.04□□□□□ -1.12
SDO1Q07953 DIF1YLR437C 402 nt8.03□□□□□ -1.12
SDO1Q07953 URA6YKL024C 615 nt8.02□□□□□ -1.13
SDO1Q07953 HXK1YFR053C 1458 nt8.01□□□□□ -1.13
SDO1Q07953 YDR510C-AYDR510C-A 117 nt8□□□□□ -1.13
SDO1Q07953 POM34YLR018C 900 nt8□□□□□ -1.13
SDO1Q07953 LSB6YJL100W 1824 nt7.99□□□□□ -1.13
SDO1Q07953 ALD5YER073W 1563 nt7.99□□□□□ -1.13
SDO1Q07953 LIP1YMR298W 453 nt7.99□□□□□ -1.13
SDO1Q07953 YBL086CYBL086C 1401 nt7.99□□□□□ -1.13
SDO1Q07953 YNL115CYNL115C 1935 nt7.97□□□□□ -1.13
SDO1Q07953 RET2YFR051C 1641 nt7.97□□□□□ -1.13
SDO1Q07953 QDR2YIL121W 1629 nt7.97□□□□□ -1.13
SDO1Q07953 YML089CYML089C 369 nt7.95□□□□□ -1.14
SDO1Q07953 ZAP1YJL056C 2643 nt7.94□□□□□ -1.14
SDO1Q07953 SAM1YLR180W 1149 nt7.94□□□□□ -1.14
SDO1Q07953 ODC1YPL134C 933 nt7.94□□□□□ -1.14
SDO1Q07953 YER190C-AYER190C-A 576 nt7.93□□□□□ -1.14
SDO1Q07953 YGR296C-AYGR296C-A 576 nt7.93□□□□□ -1.14
SDO1Q07953 YML133W-AYML133W-A 576 nt7.93□□□□□ -1.14
SDO1Q07953 PET8YNL003C 855 nt7.93□□□□□ -1.14
SDO1Q07953 YNL339W-AYNL339W-A 576 nt7.93□□□□□ -1.14
SDO1Q07953 ZTA1YBR046C 1005 nt7.93□□□□□ -1.14
SDO1Q07953 PEX25YPL112C 1185 nt7.93□□□□□ -1.14
SDO1Q07953 OYE3YPL171C 1203 nt7.93□□□□□ -1.14
SDO1Q07953 YPL283W-AYPL283W-A 576 nt7.93□□□□□ -1.14
SDO1Q07953 YHR218WYHR218W 1812 nt7.92□□□□□ -1.14
SDO1Q07953 SED1YDR077W 1017 nt7.92□□□□□ -1.14
SDO1Q07953 UFO1YML088W 2007 nt7.91□□□□□ -1.14
SDO1Q07953 TOA2YKL058W 369 nt7.91□□□□□ -1.14
SDO1Q07953 VPS75YNL246W 795 nt7.91□□□□□ -1.14
SDO1Q07953 GID8YMR135C 1368 nt7.91□□□□□ -1.14
SDO1Q07953 YLR173WYLR173W 1827 nt7.9□□□□□ -1.14
SDO1Q07953 YOR072WYOR072W 315 nt7.9□□□□□ -1.14
SDO1Q07953 SPP2YOR148C 558 nt7.9□□□□□ -1.14
SDO1Q07953 NSG2YNL156C 900 nt7.89□□□□□ -1.15
SDO1Q07953 VPS62YGR141W 1404 nt7.88□□□□□ -1.15
SDO1Q07953 DIG1YPL049C 1359 nt7.88□□□□□ -1.15
SDO1Q07953 HUA1YGR268C 597 nt7.88□□□□□ -1.15
SDO1Q07953 TOM6YOR045W 186 nt7.87□□□□□ -1.15
SDO1Q07953 GNP1YDR508C 1992 nt7.87□□□□□ -1.15
SDO1Q07953 TOM71YHR117W 1920 nt7.86□□□□□ -1.15
SDO1Q07953 PCP1YGR101W 1041 nt7.86□□□□□ -1.15
SDO1Q07953 YHL019W-AYHL019W-A 594 nt7.86□□□□□ -1.15
SDO1Q07953 YAR028WYAR028W 705 nt7.86□□□□□ -1.15
SDO1Q07953 BRR1YPR057W 1026 nt7.86□□□□□ -1.15
SDO1Q07953 LEU9YOR108W 1815 nt7.85□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 9.9 ms